Protein Alignment Shawn and CG18418

DIOPT Version :10

• Sequence 1: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Sequence 2: NP_647924.2
• Gene: CG18418 / 38572
• FlyBaseID: FBgn0035568
• Length: 311
• Species: Drosophila melanogaster
• Alignment Length: 343
• Identity: 72/343 - (20%)
• Similarity: 133/343 - (38%)
• Gaps: 81/343 - (23%)

  Fly    48 TGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGT 112
            |..|:..|.:.|||::|||:|              .:|.:.                 ...:..:
  Fly    23 TSGMLATCIVQPLDLLKTRMQ--------------ISGTLG-----------------TREYKNS 56

  Fly   113 IDAFIKISRTEGIGSLWSGLSPTLISALPSTI----IYFVAYEQFKARFTDIHYKYTRRPDTIAH 173
            .:...|:.:.|||.||::|||..|:.....|.    :|.:..:.::..|.:.       |..:|
  Fly    57 FEVLSKVLKNEGILSLYNGLSAGLLRQATYTSAKMGVYQMELDWYRKNFGNY-------PSMVA- 113

  Fly   174 DIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQS-------QRMTHAEMFGTIRQVVQSQG 231
                  ...:.::||..|.:    |.:|.|:...:|.|       .|..:..:.....::|:.:|
  Fly   114 ------SMTMGIVAGAFGAM----CGNPAEVALIRMMSDNRLMPEDRRNYKNVGDAFVRIVKDEG 168

  Fly   232 VLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSF-GVVEPTFSFSFAAGAISGSVAATITTPFDVV 295
            |:.||||..||:.|.:..:.:....|..:|:.. |.:.........|..:||.:.:..:.|.|:.
  Fly   169 VVALWRGCLPTVGRAMVVNMVQLASYSLMKNQLHGYLSEGIPLHLTAALVSGLLTSVTSMPLDMA 233

  Fly   296 KTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSF 360
            ||..|     :....|..|:...|..|   |..:.:..|..|::.|..|.|.::.|.   .|.||
  Fly   234 KTRIQ-----QMKVIDGKPEYSGTIDV---LKKVLKNEGAFAVWKGFTPYLMRMGPH---TIFSF 287

  Fly   361 EYGKSFFYHYNIDQHNRS 378
            .:         ::|.|::
  Fly   288 VF---------LEQMNKA 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:395101	24/114 (21%)
		Mito_carr	178..265	CDD:395101	21/94 (22%)
		Mito_carr	268..371	CDD:395101	22/102 (22%)
CG18418	NP_647924.2	Mito_carr	10..108	CDD:395101	24/115 (21%)
		Mito_carr	109..205	CDD:395101	24/106 (23%)
		Mito_carr	208..300	CDD:395101	24/109 (22%)