Protein Alignment Shawn and PMP34

DIOPT Version :9

• Sequence 1: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Sequence 2: NP_001246615.1
• Gene: PMP34 / 38532
• FlyBaseID: FBgn0052250
• Length: 314
• Species: Drosophila melanogaster
• Alignment Length: 337
• Identity: 76/337 - (22%)
• Similarity: 131/337 - (38%)
• Gaps: 73/337 - (21%)

  Fly    43 VASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAP 107
            |:.|..|.:..:.|. |||.:::|||.::                                  |.
  Fly    20 VSGAAGGCIAMSTFY-PLDTVRSRLQLEE----------------------------------AG 49

  Fly   108 RFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIA 172
            ....|.....:|...||..||:.||.|.|.|...|..:||..:...||              ..:
  Fly    50 DVRSTRQVIKEIVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKA--------------VAS 100

  Fly   173 HDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMT---------HAEMFGTIRQVVQ 228
            ...|.....|..||.|....|:.|...:|..::.|:::.:.:.         :..:...::.|.:
  Fly   101 GGSPSQHSALKDLLLGSIAGIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAE 165

  Fly   229 SQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSF----GVVEPTFSFSFAAGAISGSVAATIT 289
            .:|:.|||.|..|:::. |....:.:..||.||.:.    |....:.|| |..|||:.:.|..:|
  Fly   166 KEGIAGLWSGTIPSLML-VSNPALQFMMYEMLKRNIMRFTGGEMGSLSF-FFIGAIAKAFATVLT 228

  Fly   290 TPFDVVKTHEQIEFGEKFIFSDNPPKQVA-----TKSVAMRLASIYRMGGVPAIFSGLGPRLFKV 349
            .|..:|:|.::....|    ||:.|...|     |:|....:.||.:..|:..:|.||..::.:.
  Fly   229 YPLQLVQTKQRHRSKE----SDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQT 289

  Fly   350 APACAIMISSFE 361
            ....|:|..::|
  Fly   290 VLTAALMFMAYE 301

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:278578	27/115 (23%)
		Mito_carr	178..265	CDD:278578	20/99 (20%)
		Mito_carr	268..371	CDD:278578	27/99 (27%)
PMP34	NP_001246615.1	Mito_carr	15..96	CDD:278578	25/110 (23%)
		Mito_carr	105..202	CDD:278578	20/97 (21%)
		Mito_carr	214..303	CDD:278578	25/92 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45441473
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840