DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and Tpc2

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001246511.1 Gene:Tpc2 / 37983 FlyBaseID:FBgn0035078 Length:323 Species:Drosophila melanogaster


Alignment Length:347 Identity:82/347 - (23%)
Similarity:144/347 - (41%) Gaps:61/347 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPA 101
            ::.:|.|.....|| .|.....||||:|.|.|.|.:.:.::|                       
  Fly     8 VQLMQAVGGGIAGA-ATRTITQPLDVLKIRFQMQVEPVTNHK----------------------- 48

  Fly   102 AAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTR 166
                ..::.|.|.||..:...||:..::.|.:...:.::...::.|.:|||.::......|...|
  Fly    49 ----GSKYRGVIHAFKSVYAEEGMRGMFRGHNSGQVLSISYALVQFWSYEQLRSMAHQFDYWRER 109

  Fly   167 RPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKM----QSQRMTHAEMFGTIRQVV 227
                         |||:..:.|.....|......|.:::||:|    .|.|.:....|..:|:|.
  Fly   110 -------------PFLMFFICGGIAGCLGAVAAQPFDVVRTQMVAADPSSRRSQMNTFTGLRKVY 161

  Fly   228 QSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSFGVVEPT-------FSFSFAAGAISGSVA 285
            :.:|.:||.||||.|:::..|..|..:..|:||.::..:.:|.       .:|.|..||:||.:|
  Fly   162 KMEGWMGLSRGLPFTLVQVFPLVGANFLFYKYLNAAVLMAKPPDQRQEIHGAFLFLNGALSGVLA 226

  Fly   286 ATITTPFDVVKTHEQIEF--GEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFK 348
            ..|..|.|::|...|:..  .|:..|..||    ...::...:.:.:|..|:...:.|:.|.|.|
  Fly   227 KMIVYPADLLKKRIQLMAFKQERKTFGRNP----ECPTILGCITTTFREEGIGGFYKGMLPTLLK 287

  Fly   349 VAPACAIMISSFEYGKSFFYHY 370
            .....|:..|.::   .|..||
  Fly   288 AGLMSAVYFSIYD---MFKRHY 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 25/119 (21%)
Mito_carr 178..265 CDD:395101 27/90 (30%)
Mito_carr 268..371 CDD:395101 28/112 (25%)
Tpc2NP_001246511.1 Mito_carr 23..99 CDD:395101 21/102 (21%)
Mito_carr 108..194 CDD:395101 26/98 (27%)
Mito_carr 216..307 CDD:395101 26/98 (27%)

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