DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and Tyler

DIOPT Version :9

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster


Alignment Length:397 Identity:168/397 - (42%)
Similarity:237/397 - (59%) Gaps:58/397 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DPRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQ----QQALLSNKCFLYCNGLMDHICP 92
            |||:||:|:|||.||..|.::|...:|||:|:|||:|.|    |:..:|..|::|.||||.|:|.
  Fly    38 DPRYRIKPMQQVVSALVGGLITTFVVTPLEVVKTRVQTQHAIRQRPTVSKLCYVYHNGLMTHVCR 102

  Fly    93 ----CGPDT-PNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQ 152
                |.|.. .:|...:|   ..|.:|||:||..|.|...||:||||||:||||||||||:.||.
  Fly   103 SSDICVPKPGRDPQNLRP---LRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPSTIIYFLTYEY 164

  Fly   153 FKARFTDIHYKYTRRPDTIAHD-IP-------------------------HPIPFLVPLLAGVSG 191
            .|...:.|:....:..::...| :|                         ..:|:.||:.:|:..
  Fly   165 IKNSLSHIYLVSQKFEESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPYYVPMASGICS 229

  Fly   192 RILAVTCVSPVELIRTKMQSQRMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTC 256
            |.:.||.::|:|::|.||||:.||:||::..:|.:::..|:||||||.|||::||.||||.||..
  Fly   230 RTIVVTAITPIEMVRIKMQSEYMTYAELWRVLRSLIRQHGILGLWRGWPPTVMRDAPFSGTYWAV 294

  Fly   257 YEYLKSSFGVVEPTFSFSFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSD---------- 311
            ||.:|.:|.|.||||.|||..|||||:||..:|.|||::.||.|||.|:..::.:          
  Fly   295 YEAIKRAFSVTEPTFLFSFLTGAISGAVATFVTMPFDLITTHTQIELGQDVLYEEIGAGTGAGTG 359

  Fly   312 --------NPPKQVATK--SVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYGKSF 366
                    .|...||..  ||..|:..|||:.||..::.|:.||:.:|.||||||||:|||.|||
  Fly   360 TGAGARPKTPQSAVANSRPSVLSRMRQIYRLQGVRGLYVGVMPRMLRVVPACAIMISTFEYSKSF 424

  Fly   367 FYHYNID 373
            |:|||:|
  Fly   425 FFHYNLD 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:278578 60/128 (47%)
Mito_carr 178..265 CDD:278578 40/86 (47%)
Mito_carr 268..371 CDD:278578 55/122 (45%)
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 62/132 (47%)
Mito_carr 216..302 CDD:278578 40/85 (47%)
Mito_carr 306..429 CDD:278578 55/122 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438219
Domainoid 1 1.000 64 1.000 Domainoid score I3661
eggNOG 1 0.900 - - E1_KOG0761
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I1691
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001594
OrthoInspector 1 1.000 - - mtm6545
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45760
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1001
98.890

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