Protein Alignment Shawn and sea

DIOPT Version :10

• Sequence 1: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Sequence 2: NP_001027175.1
• Gene: sea / 3772221
• FlyBaseID: FBgn0037912
• Length: 317
• Species: Drosophila melanogaster
• Alignment Length: 343
• Identity: 87/343 - (25%)
• Similarity: 135/343 - (39%)
• Gaps: 81/343 - (23%)

  Fly    43 VASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAP 107
            ||...||. :..|...|.:.:||:||..::                            .|||
  Fly    38 VAGGITGG-IEICITYPTEYVKTQLQLDEK----------------------------GAAK--- 70

  Fly   108 RFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIA 172
            :::|..|...|.....|...|:.|||..:..::|.:...|.|:|..|:...|..
  Fly    71 KYNGIFDCVKKTVGERGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNAVDSR----------- 124

  Fly   173 HDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTK-MQSQRMTHAEMFG---TIRQVVQSQGVL 233
            ..:.:....|..|.|||...|:|||   |:|.|:.| :..||..:.:..|   .:.|:::|:|:.
  Fly   125 GQLSNSGKLLCGLGAGVCEAIVAVT---PMETIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGIS 186

  Fly   234 GLWRGLPPTILRDVPFSGIYWTCYEYLKSSF----------GVVEPTFSFSFAAGAISGSVAATI 288
            |:::||.||||:......|.:...|.||..:          .:|...|      |||:|:.:...
  Fly   187 GIYKGLTPTILKQGSNQAIRFFVLESLKDLYKGDDHTKPVPKLVVGVF------GAIAGAASVFG 245

  Fly   289 TTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPAC 353
            .||.|||||..|.....|:            |:.|.....|.:..|..|.:.|..|||.:|   |
  Fly   246 NTPLDVVKTRMQGLEASKY------------KNTAHCAVEILKNEGPAAFYKGTVPRLGRV---C 295

  Fly   354 AIMISSFEYGKSFFYHYN 371
            ..:..:|....||...:|
  Fly   296 LDVAITFMIYDSFMDLFN 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:395101	26/115 (23%)
		Mito_carr	178..265	CDD:395101	30/100 (30%)
		Mito_carr	268..371	CDD:395101	28/102 (27%)
sea	NP_001027175.1	Mito_carr	34..117	CDD:395101	25/110 (23%)
		Mito_carr	125..220	CDD:395101	30/97 (31%)
		Mito_carr	235..314	CDD:395101	28/94 (30%)