DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and Slc25a39

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001019963.1 Gene:Slc25a39 / 360636 RGDID:1306193 Length:359 Species:Rattus norvegicus


Alignment Length:371 Identity:148/371 - (39%)
Similarity:204/371 - (54%) Gaps:57/371 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLS-----------------------NK 78
            |.||||:.::..||:||:.|||||||:|.|||:|:..:.|                       .|
  Rat     9 ISPLQQMVASGAGAVVTSLFMTPLDVVKVRLQSQRPTVASELTTPSRFWSLSYTKSPSTLQSPGK 73

  Fly    79 CFLYCNGLMD--HICP----CGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLI 137
            |.|||||:::  ::||    |.....:|.      ||:||:|||:||.|.||..:|||||..||:
  Rat    74 CLLYCNGVLEPLYLCPNGTRCATWFQDPT------RFTGTLDAFVKIVRHEGTRTLWSGLPATLV 132

  Fly   138 SALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPV 202
            ..:|:|.|||.||:|.||....         .::..|:      ..|::||...|:..||.|||:
  Rat   133 MTVPATAIYFTAYDQLKAFLCG---------QSLTSDL------YAPMVAGALARMGTVTVVSPL 182

  Fly   203 ELIRTKMQSQRMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSFG-- 265
            ||:|||:|:|.:::.|:...::..|...|...||.|..||.|||||||.:||..||.:||...  
  Rat   183 ELVRTKLQAQHVSYRELAACVQAAVAQGGWRSLWLGWGPTALRDVPFSALYWFNYELVKSQLNGP 247

  Fly   266 --VVEPTFSFSFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLAS 328
              ..:.:...||.||.|||.||||:|.|||||||..|:..|........||:   ..|..:.|..
  Rat   248 RQKEQTSVGISFVAGGISGMVAATLTLPFDVVKTQRQMSLGAVEAMRVKPPR---VDSTWLLLRR 309

  Fly   329 IYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYGKSFFYHYNIDQ 374
            |....|...:|:|..||:.|.||:||||||::|:|||||:..|.:|
  Rat   310 IQAESGTRGLFAGFLPRIIKAAPSCAIMISTYEFGKSFFHRLNQEQ 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 61/148 (41%)
Mito_carr 178..265 CDD:395101 37/86 (43%)
Mito_carr 268..371 CDD:395101 46/102 (45%)
Slc25a39NP_001019963.1 Mito_carr 9..152 CDD:395101 62/148 (42%)
Solcar 1 9..151 61/147 (41%)
Solcar 2 159..243 37/89 (42%)
Mito_carr 161..246 CDD:395101 37/90 (41%)
Solcar 3 253..347 43/96 (45%)
Mito_carr 254..350 CDD:395101 46/98 (47%)

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