Protein Alignment Shawn and Rim2

DIOPT Version :9

• Sequence 1: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Sequence 2: NP_608615.1
• Gene: Rim2 / 33350
• FlyBaseID: FBgn0031359
• Length: 365
• Species: Drosophila melanogaster
• Alignment Length: 402
• Identity: 87/402 - (21%)
• Similarity: 157/402 - (39%)
• Gaps: 122/402 - (30%)

  Fly    44 ASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDH------------------- 89
            ::...||:||.    ||:|:|||||       |:..|:..:.|.::
  Fly    17 SAGTVGAVVTC----PLEVVKTRLQ-------SSTAFMTPSRLAENAGGGPANGGQSELLRPEQR 70

  Fly    90 -------------------------ICPCGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLW 129
                                     |..||       .:...|:....:.....|.:.||..:|:
  Fly    71 RKLSTTILRNRSQPQVIGGVRRIMAISHCG-------ISSTTPKSMSIVQCLRHIVQNEGPRALF 128

  Fly   130 SGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRIL 194
            .||.|.|:...||..|||..|.|.|.....:.:        :..|.|     ||.:::..|...:
  Fly   129 KGLGPNLVGVAPSRAIYFCTYSQTKNTLNSLGF--------VERDSP-----LVHIMSAASAGFV 180

  Fly   195 AVTCVSPVELIRTKMQSQRMTHAEMFGTIRQVVQ----SQGVLGLWRGLPPTILRDVPFSGI--- 252
            :.|..:|:..::|:||....:..:|  |:||.::    ..||...::|:..:      :.||
  Fly   181 SSTATNPIWFVKTRMQLDYNSKVQM--TVRQCIERVYAQGGVAAFYKGITAS------YFGICET 237

  Fly   253 --YWTCYEYLKSSFGVVEP------------TFSFSFAAGAISGSVAATITTPFDVVKTHEQIEF 303
              ::..||::||.  ::|.            .|.....|||:|.::|:.|..|.:|.:|..: |.
  Fly   238 MVHFVIYEFIKSK--LLEQRNQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLR-EE 299

  Fly   304 GEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYGKSFFY 368
            |.|:            .|....|.::::..|...::.||..:|.:..|..|||::::|   :..|
  Fly   300 GNKY------------NSFWQTLHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYE---AVVY 349

  Fly   369 HYNIDQHNRSNQ 380
            ......:|:||:
  Fly   350 VLTRRFNNKSNE 361

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:278578	35/158 (22%)
		Mito_carr	178..265	CDD:278578	21/95 (22%)
		Mito_carr	268..371	CDD:278578	26/114 (23%)
Rim2	NP_608615.1	Mito_carr	8..156	CDD:278578	35/156 (22%)
		Mito_carr	163..253	CDD:278578	23/104 (22%)
		Mito_carr	268..355	CDD:278578	25/102 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45441518
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840