DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and Slc25a40

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_848881.2 Gene:Slc25a40 / 319653 MGIID:2442486 Length:337 Species:Mus musculus


Alignment Length:346 Identity:159/346 - (45%)
Similarity:212/346 - (61%) Gaps:25/346 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDT 97
            |...:.||||:.::||||::|:..:|||||:|.|||||.......|||||.||||||:|.|..::
Mouse    10 PTIPVTPLQQMIASCTGAVLTSLMVTPLDVVKIRLQAQNNPFPKGKCFLYSNGLMDHMCVCEEES 74

  Fly    98 PNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARF-TDIH 161
            ......||. .|.||:|||:||.|.|||.||||||.|||:.|:|:|:|||..|||..|.. |.:.
Mouse    75 KKAWYKKPG-NFRGTLDAFLKILRNEGIKSLWSGLPPTLVMAIPATVIYFTCYEQLSAFLKTKLG 138

  Fly   162 YKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEMFGTIRQV 226
            ...||                :|::|||..|..|||.:||:||||||:||::.::.|::..:...
Mouse   139 ENETR----------------IPIVAGVVARFGAVTVISPLELIRTKVQSKKFSYKELYQFVSMR 187

  Fly   227 VQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLK----SSFGVVEPTFSFSFAAGAISGSVAAT 287
            |...|.:.||:|..||||||||||.:||..||.||    ...|:.||||..:|.:||:|||.||.
Mouse   188 VSEDGWISLWKGWAPTILRDVPFSAMYWYNYENLKRWLCEKSGLYEPTFMINFTSGALSGSFAAV 252

  Fly   288 ITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPA 352
            .|.|||||||.:|.:...........|..::|.::   :.:|....|...:|:||.|||.|:.||
Mouse   253 ATLPFDVVKTQKQTQLWTNEYCKFPAPLDMSTWTI---MKNIVADKGFSGLFTGLIPRLVKIVPA 314

  Fly   353 CAIMISSFEYGKSFFYHYNID 373
            |||||||:|.|||||...|::
Mouse   315 CAIMISSYELGKSFFQKQNVE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 66/120 (55%)
Mito_carr 178..265 CDD:395101 40/90 (44%)
Mito_carr 268..371 CDD:395101 47/102 (46%)
Slc25a40NP_848881.2 Mito_carr 13..137 CDD:395101 67/124 (54%)
Solcar 1 14..132 65/118 (55%)
Solcar 2 140..224 42/99 (42%)
Mito_carr 146..229 CDD:395101 39/82 (48%)
Mito_carr 232..331 CDD:395101 47/101 (47%)
Solcar 3 234..328 43/96 (45%)

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