DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and Slc25a38

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001025203.2 Gene:Slc25a38 / 301067 RGDID:1311914 Length:326 Species:Rattus norvegicus


Alignment Length:358 Identity:89/358 - (24%)
Similarity:150/358 - (41%) Gaps:74/358 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AASAAMAAASSQNPSKATMTDPRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLS 76
            |.||.:.:...::..:..|..|..:......::..|:    |..|. |||::|||||..|     
  Rat    25 ARSALLPSQDVEDTVETLMLHPVIKAFLCGSISGTCS----TLLFQ-PLDLLKTRLQTLQ----- 79

  Fly    77 NKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALP 141
                                 |:..    .||..|.:..|:|:.|||.:..||.|:||:::..:|
  Rat    80 ---------------------PSDV----GPRRVGMLSVFLKVVRTESLLGLWKGMSPSIVRCVP 119

  Fly   142 STIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIR 206
            ...|||......|..|..                .||...|..::.|:..|.:|..|:||:.:::
  Rat   120 GVGIYFGTLYSSKQYFLR----------------GHPPTALESVILGMGSRSVAGVCMSPITVVK 168

  Fly   207 TKMQSQRMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSF------- 264
            |:.:|...::..::..:|.:..|:|..||:|||..|:|||.||||:|...|...:::.       
  Rat   169 TRYESGAYSYESVYAALRSIYCSEGSRGLFRGLTATLLRDAPFSGLYLMFYSQTRATVLHGADEL 233

  Fly   265 -GVVEPTFSFSFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLAS 328
             ..:.|..:||  .|..:|.:|:.:|.|.||:|||.|:             ..|..:.:......
  Rat   234 DAALMPLVNFS--CGVFAGILASLVTQPADVIKTHMQL-------------STVKCQCIGQVATL 283

  Fly   329 IYRMGGVPAIFSGLGPRLFKVAPACAIMISSFE 361
            |.:..|:...|.|..||..:.....|:..:.:|
  Rat   284 ILKTHGLRGFFHGSVPRALRRTLMAAMAWTVYE 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 32/119 (27%)
Mito_carr 178..265 CDD:395101 28/94 (30%)
Mito_carr 268..371 CDD:395101 23/94 (24%)
Slc25a38NP_001025203.2 Solcar 1. /evidence=ECO:0000255|HAMAP-Rule:MF_03064 45..134 32/123 (26%)
Mito_carr 46..137 CDD:395101 33/125 (26%)
Mito_carr 140..223 CDD:395101 28/82 (34%)
Solcar 2. /evidence=ECO:0000255|HAMAP-Rule:MF_03064 141..225 27/83 (33%)
Solcar 3. /evidence=ECO:0000255|HAMAP-Rule:MF_03064 237..321 23/95 (24%)
Mito_carr 239..326 CDD:395101 23/93 (25%)

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