DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and pet802

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_595139.1 Gene:pet802 / 2540171 PomBaseID:SPBC1271.11 Length:258 Species:Schizosaccharomyces pombe


Alignment Length:341 Identity:75/341 - (21%)
Similarity:127/341 - (37%) Gaps:95/341 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 MTDPRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCG 94
            |||...:.:|:  :....:| :|....:.||..|.||:|:.                        
pombe     1 MTDDEVQWKPI--LVGGLSG-LVAETLVFPLSTIITRVQSS------------------------ 38

  Fly    95 PDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTD 159
                                  :...:..|...|:.|||..|:|.|||...:|..||..|||   
pombe    39 ----------------------LSFQQAGGFQHLYRGLSSVLVSTLPSASSFFFVYEYAKAR--- 78

  Fly   160 IHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEMFGTIR 224
                  ::|....|           |::.....:::...::|.|::|.:.|..:.       ::.
pombe    79 ------QKPGVRNH-----------LVSASVAEVVSCGILAPAEVVRQRAQISKT-------SVS 119

  Fly   225 QVVQS--QGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSFGVVEPTFSFSFAAGAISGSVAAT 287
            |:.||  .....||........|:||.:...:..||..|..|...:..|.....| |:||::.|.
pombe   120 QIFQSMIHNYRDLWHSFKGMCGRNVPATAFQFVLYEQFKKKFSATDHVFGAPKGA-ALSGAITAA 183

  Fly   288 ITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPA 352
            :.||.||:||  ||..           :..:.:.|..|   ||:..|:.....|||.|:|..:..
pombe   184 VLTPLDVIKT--QINL-----------RPESYRKVVRR---IYKENGIFGFEKGLGLRVFASSLG 232

  Fly   353 CAIMISSFEYGKSFFY 368
            .:|.:.::|:.||..:
pombe   233 LSIYLGTYEHVKSHLH 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 25/119 (21%)
Mito_carr 178..265 CDD:395101 16/88 (18%)
Mito_carr 268..371 CDD:395101 28/101 (28%)
pet802NP_595139.1 PTZ00168 7..239 CDD:185494 69/324 (21%)

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