Protein Alignment Shawn and mme1

DIOPT Version :10

• Sequence 1: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Sequence 2: NP_588318.1
• Gene: mme1 / 2538899
• PomBaseID: SPCC1442.03
• Length: 338
• Species: Schizosaccharomyces pombe
• Alignment Length: 377
• Identity: 100/377 - (26%)
• Similarity: 155/377 - (41%)
• Gaps: 103/377 - (27%)

  Fly    43 VASACTGAMVTACF-MTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPA 106
            :|....||  ||.| |..||.:|||   ||.||.:||
pombe    20 IAGGIGGA--TADFLMHSLDTVKTR---QQAALYTNK---------------------------- 51

  Fly   107 PRFSGTIDAFIKISRTEGI-GSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDT 170
              ::|.:..:..|...||: ..|:||:.|.||.:||:|.::|.:||            ||:|...
pombe    52 --YNGMVKCYSTILCEEGVFHGLYSGVCPMLIGSLPATALFFSSYE------------YTKRHLM 102

  Fly   171 IAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQ----------RMTHAEMFGTIRQ 225
            ..:::|..:.|   ||||..|.:.|.....|.|:::|::|.|          ...:....|.::|
pombe   103 SNYNLPETLCF---LLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQ 164

  Fly   226 VVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLK---------SSFGVVEPTFSFSFAAGAIS 281
            :.:.:|:...:.|...|||||:||||.....||.|:         ...||..     ....|:::
pombe   165 IAKQEGMKTFFYGYRATILRDIPFSGFQLLFYEKLRQVAQKECGQKDIGVFR-----ELITGSLA 224

  Fly   282 GSVAATITTPFDVVKTH------------EQIEFGEKFIFSDNPPKQVATKS-----VAMR--LA 327
            |:.|..:|||.||.||.            :.|..|..|...|...|..:..|     :.:|  |.
pombe   225 GAGAGFLTTPLDVAKTRLQTMIRTTDKVSDDINSGRYFFAKDENSKSKSAASLVKPKIGIRHVLG 289

  Fly   328 SIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYGKSFFYHYNIDQHNRSN 379
            .:|:..|:..:|.|.|||:|..:...::|.        .||...|...|::|
pombe   290 GLYKSEGLLGLFRGFGPRIFWTSSQSSLMF--------VFYEGIIRLFNKNN 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:395101	34/117 (29%)
		Mito_carr	178..265	CDD:395101	28/105 (27%)
		Mito_carr	268..371	CDD:395101	29/121 (24%)
mme1	NP_588318.1	PTZ00168	17..>241	CDD:185494	77/275 (28%)
		Mito_carr	210..333	CDD:395101	33/135 (24%)