DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and Slc25a28

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_660138.1 Gene:Slc25a28 / 246696 MGIID:2180509 Length:364 Species:Mus musculus


Alignment Length:362 Identity:98/362 - (27%)
Similarity:156/362 - (43%) Gaps:67/362 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PSKATMTDPRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDH 89
            |:.||:|        ...||.|..| ::..|.|.|:|.:|||:|:.|                  
Mouse    67 PAGATVT--------THMVAGAVAG-ILEHCVMYPIDCVKTRMQSLQ------------------ 104

  Fly    90 ICPCGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFK 154
                 ||        ||.|:...::|..:|.||||:.....||:.|...|.|:..:||..||:.|
Mouse   105 -----PD--------PAARYRNVLEALWRIMRTEGLWRPMRGLNVTATGAGPAHALYFACYEKLK 156

  Fly   155 ARFTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEM 219
            ...:|:.:     |...:|        :....||....:|....::|.|:::.:||.....:..:
Mouse   157 KTLSDVIH-----PGGNSH--------IANGAAGCVATLLHDAAMNPAEVVKQRMQMYNSPYHRV 208

  Fly   220 FGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSFGV---VEPTFSFSFAAGAIS 281
            ...:|.|.|::|....:|.....:..:|||..|::..||:|:..|..   ..|  |.....||.:
Mouse   209 TDCVRAVWQNEGAGAFYRSYTTQLTMNVPFQAIHFMTYEFLQEHFNPQRRYNP--SSHVLCGACA 271

  Fly   282 GSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRL 346
            |:|||..|||.||.||  .:...|....:.|....:...:.|.|  ::|::|||.|.|.|:..|:
Mouse   272 GAVAAAATTPLDVCKT--LLNTQESLALNSNITGHITGMASAFR--TVYQVGGVTAYFRGVQARV 332

  Fly   347 FKVAPACAIMISSFEYGKSFFYHYNIDQHNRSNQATK 383
            ....|:.||..|.:|     |:.|.|.:.....:|.|
Mouse   333 IYQIPSTAIAWSVYE-----FFKYLITKRQEEWRAGK 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 34/119 (29%)
Mito_carr 178..265 CDD:395101 19/86 (22%)
Mito_carr 268..371 CDD:395101 33/102 (32%)
Slc25a28NP_660138.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Solcar 1 70..158 37/127 (29%)
Mito_carr 71..161 CDD:395101 36/129 (28%)
Solcar 2 168..252 20/91 (22%)
Mito_carr 169..253 CDD:395101 20/91 (22%)
Solcar 3 263..352 31/97 (32%)
Mito_carr <279..356 CDD:395101 27/85 (32%)
Blue background indicates that the domain is not in the aligned region.

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