DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawn and LOC1281880

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_061507915.1 Gene:LOC1281880 / 1281880 VectorBaseID:AGAMI1_009042 Length:398 Species:Anopheles gambiae


Alignment Length:385 Identity:217/385 - (56%)
Similarity:277/385 - (71%) Gaps:23/385 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AASAAMAAASSQNPSKATMTDPRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLS 76
            :..:::|.|..::     |.|.||||||.||:.|:|:||:||:.|||||||:||||||||:.|:|
Mosquito     4 SVGSSVAVAPGED-----MDDSRFRIRPYQQILSSCSGALVTSLFMTPLDVVKTRLQAQQKVLIS 63

  Fly    77 NKCFLYCNGLMDHICPCGPDTP-NPAAAKPAP-RFSGTIDAFIKISRTEGIGSLWSGLSPTLISA 139
            |||:|||||||||||||||:.| .||.....| .|:||||||.||||.||:.||||||.||||.|
Mosquito    64 NKCYLYCNGLMDHICPCGPNGPMAPATISKRPLHFTGTIDAFTKISRYEGVPSLWSGLGPTLILA 128

  Fly   140 LPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVEL 204
            ||:|:|||||||||:.|..::   |.||....|.     :|..:|||||.|.|:||||.|:|:||
Mosquito   129 LPTTVIYFVAYEQFRIRLKEL---YQRRKGRDAE-----LPIWLPLLAGSSARVLAVTIVNPLEL 185

  Fly   205 IRTKMQSQRMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSFGVVEP 269
            |||||||:::::.|:....|.:::.||:||||:|..|||||||||||||||.||..|..|.|.:|
Mosquito   186 IRTKMQSEKLSYREVGQAFRSMLRVQGILGLWKGFFPTILRDVPFSGIYWTTYESFKKHFNVSQP 250

  Fly   270 TFSFSFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDN-------PPKQVATKSVAMRLA 327
            ||:||||.|||||.|||..|.||||||||:||.|||:|:::.|       |.|.|.:......:.
Mosquito   251 TFAFSFAGGAISGGVAAFFTVPFDVVKTHQQIAFGEQFLYAQNGDSKGAGPKKPVRSIGTFETMG 315

  Fly   328 SIYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYGKSFFYHYNIDQH-NRSNQATKGPG 386
            .|::|.|:..:|:||.|||.||||||||||:||||||:|||.||:.:: .|.::...|.|
Mosquito   316 RIFQMNGIRGLFAGLTPRLVKVAPACAIMIASFEYGKNFFYRYNVQRYQERKDRVASGSG 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 85/121 (70%)
Mito_carr 178..265 CDD:395101 50/86 (58%)
Mito_carr 268..371 CDD:395101 62/109 (57%)
LOC1281880XP_061507915.1 None

Return to query results.
Submit another query.