DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and Slc25a20

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_446417.2 Gene:Slc25a20 / 117035 RGDID:621443 Length:301 Species:Rattus norvegicus


Alignment Length:336 Identity:84/336 - (25%)
Similarity:137/336 - (40%) Gaps:66/336 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPA 101
            |.||:.:.:...|.:.......|||.:|.|||.|..:|                    |..|   
  Rat     8 ISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSL--------------------PGQP--- 49

  Fly   102 AAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTR 166
                 |.:|||||.|.|....|||..|:.|::..:|...|...:.|..:...|.       ...:
  Rat    50 -----PMYSGTIDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKR-------LQQK 102

  Fly   167 RPDTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEMF-GTI---RQVV 227
            .|:   .::.:|..|...:|:||    .....::|.|.|:..:|.|..:....: ||:   :::.
  Rat   103 SPE---DELTYPQLFTAGMLSGV----FTTGIMTPGERIKCLLQIQASSGKNKYSGTLDCAKKLY 160

  Fly   228 QSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSF-----GVVEPTFSFSFAAGAISGSVAAT 287
            |..|:.|.::|...|::||||.||:|:..||:||:.|     .|.:.:......||..:|.....
  Rat   161 QEFGIRGFYKGTVLTLMRDVPASGMYFMTYEWLKNLFTPQGKSVHDLSVPRVLVAGGFAGIFNWV 225

  Fly   288 ITTPFDVVKTHEQIEFGEKFIFSDNPPKQVAT--KSVAMRLASIYRMGGVPAIFSGLGPRLFKVA 350
            :..|.||:|:.          |...||.:...  :.|   |..:.|..||.:::.|....:.:..
  Rat   226 VAIPPDVLKSR----------FQTAPPGKYPNGFRDV---LRELIREEGVTSLYKGFNAVMIRAF 277

  Fly   351 PACAIMISSFE 361
            ||.|.....||
  Rat   278 PANAACFLGFE 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 31/119 (26%)
Mito_carr 178..265 CDD:395101 29/95 (31%)
Mito_carr 268..371 CDD:395101 21/96 (22%)
Slc25a20NP_446417.2 Mito_carr 6..103 CDD:395101 32/129 (25%)
Solcar 1 8..99 32/125 (26%)
Mito_carr 106..198 CDD:395101 28/95 (29%)
Solcar 2 108..196 28/91 (31%)
Mito_carr 206..294 CDD:395101 21/96 (22%)
Solcar 3 207..293 21/95 (22%)

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