DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and slc25a47

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_004917228.1 Gene:slc25a47 / 100496270 XenbaseID:XB-GENE-6041480 Length:293 Species:Xenopus tropicalis


Alignment Length:339 Identity:79/339 - (23%)
Similarity:126/339 - (37%) Gaps:77/339 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VASACTGAMVTACFMT---PLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAK 104
            :|....||:..||.:.   |||.:|.|:|.|:.          .||    |..|           
 Frog     1 MADFIAGALGGACGVMVGYPLDTVKVRIQTQKN----------YNG----IWHC----------- 40

  Fly   105 PAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTR-RP 168
                    :.:..|:.|..|   .:.|:|..:.....|:.|.|..|.........:.|..|. :|
 Frog    41 --------VRSTYKMERVSG---FFKGVSMPMSMVSVSSSIVFGVYRNVLRNLCKLKYGTTAVKP 94

  Fly   169 DTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQR----------MTHAEMFGTI 223
            ...  ||     ||....||  |..:.|:  ||.::.:.::|:|.          :|..:..|.|
 Frog    95 SKF--DI-----FLSGYAAG--GAQILVS--SPADMAKVRLQTQMCPPNSTTCSLLTGPKYSGPI 148

  Fly   224 R---QVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSFGVVEPTFSFSFA---AGAISG 282
            .   .:|:.:|.|||::|....:.||......|:..|..|:......|.:.|....   ||..:|
 Frog   149 NCLLTIVKEEGFLGLYKGSSALMFRDCHSFATYFLSYAILREWLLPFEQSHSELIGVLFAGGFAG 213

  Fly   283 SVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLF 347
            .||..|.||.||:|:..|:         |...|| ..:.|...:....|..|:..:|.||.....
 Frog   214 VVAWGIATPMDVIKSRLQV---------DGVTKQ-RYRGVIHCITESVRQEGITVLFKGLSLNCL 268

  Fly   348 KVAPACAIMISSFE 361
            :..|...::..::|
 Frog   269 RAFPVNMVVFLTYE 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 25/118 (21%)
Mito_carr 178..265 CDD:395101 24/99 (24%)
Mito_carr 268..371 CDD:395101 25/97 (26%)
slc25a47XP_004917228.1 Mito_carr 1..84 CDD:395101 25/118 (21%)
Mito_carr 100..193 CDD:395101 24/96 (25%)
Mito_carr 198..286 CDD:395101 24/95 (25%)

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