DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawn and ucp1

DIOPT Version :10

Sequence 1:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001107354.1 Gene:ucp1 / 100135179 XenbaseID:XB-GENE-963773 Length:309 Species:Xenopus tropicalis


Alignment Length:344 Identity:77/344 - (22%)
Similarity:125/344 - (36%) Gaps:85/344 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAA 103
            |..:..:|.|.|.:...|..|||..|.|||.|.:...|..    .||:                 
 Frog    13 PAVKFIAAGTAACIADLFTFPLDTAKVRLQIQGETTGSGA----ANGI----------------- 56

  Fly   104 KPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRP 168
                |:.|.......|.:|||..||::||...|...:....|....|:..|..:|:...|     
 Frog    57 ----RYKGVFGTISTIVKTEGPKSLYNGLVAGLQRQMSFASIRIGLYDTVKLFYTNGKEK----- 112

  Fly   169 DTIAHDIPHPIPFLVPLLAGVSGRI--------LAVTCVSPVELIRTKMQSQRMTHAEMFGTIRQ 225
                              ||:..||        ||||...|.::::.:.|:|    |.:.|..|:
 Frog   113 ------------------AGIGSRILAGCTTGALAVTVAQPTDVVKVRFQAQ----ANLQGVKRR 155

  Fly   226 ----------VVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSS---FGVVEPTFSFSFAA 277
                      :.:.:||.|||:|..|.:.|:...:......|:.:|.:   :.::.......|.:
 Frog   156 YNGTMDAYKTIAKKEGVRGLWKGTFPNVTRNAIVNCTELVTYDVIKENLLHYKLMTDNLPCHFVS 220

  Fly   278 GAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGL 342
            ...:|.....|.:|.|||||.          :.::||.|.  ||......::....|..|.:.|.
 Frog   221 AFGAGFCTTVIASPVDVVKTR----------YMNSPPGQY--KSALNCAWTMITKEGPTAFYKGF 273

  Fly   343 GPRLFKVAPACAIMISSFE 361
            .|...::.....:|..|:|
 Frog   274 VPSFLRLGSWNVVMFVSYE 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 30/119 (25%)
Mito_carr 178..265 CDD:395101 24/107 (22%)
Mito_carr 268..371 CDD:395101 21/94 (22%)
ucp1NP_001107354.1 Mito_carr 10..110 CDD:395101 31/121 (26%)
Mito_carr 111..208 CDD:395101 25/123 (20%)
Mito_carr 211..302 CDD:395101 21/94 (22%)

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