DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tcs1 and AT5G60590

DIOPT Version :10

Sequence 1:NP_001027444.1 Gene:Tcs1 / 3772640 FlyBaseID:FBgn0061361 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_974970.1 Gene:AT5G60590 / 836180 AraportID:AT5G60590 Length:288 Species:Arabidopsis thaliana


Alignment Length:225 Identity:88/225 - (39%)
Similarity:131/225 - (58%) Gaps:13/225 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RTPVCAV--------GDEAALQLARQCLLGGQVIALPTDTVYGLACDANNETAIQQLYEIKGRDE 85
            |...|.|        ..||..|.|.:.:...:|||:||||:||.||||.:..|:.::||||||..
plant    56 RAETCVVSKSCLVHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDACSLEAVSRIYEIKGRKL 120

  Fly    86 HKPVAICVHNIDALRRFGQAAHLSDELLTRLLPGPLTIVIER-TSQLSNRFLNPSTSKIGIRIPD 149
            ..|:||||.::..::|....:||...||..|||||:|:|::| .|.:..:.|||....||:|:||
plant   121 TSPLAICVGDVLDIKRVATTSHLPHGLLDSLLPGPVTLVLQRGESSILEKSLNPGIGTIGVRVPD 185

  Fly   150 FNFMRDLCAVWQEKPLALTSANRSSAPSSLQVSEFRSLWPQLGAVFDAGRIGLTEERRLASTVID 214
            ..|:|:: :......|||||||.|...||:.|.:|.:||.....|:|.   ||....|..||::|
plant   186 CEFIREV-SRGSGSVLALTSANLSGDRSSVCVKDFENLWQHCAYVYDG---GLLPSGRAGSTIVD 246

  Fly   215 LATPGYYEIVRAGVALKPTLSLMEEFGIRE 244
            |...|.|:|:|.|.|.:.|::::|::.:.|
plant   247 LTKVGKYKIIRPGSAKQATVAILEKYLLEE 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tcs1NP_001027444.1 TsaC 37..228 CDD:439780 80/191 (42%)
AT5G60590NP_974970.1 TsaC 77..259 CDD:439780 78/185 (42%)

Return to query results.
Submit another query.