DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tcs1 and yrdc

DIOPT Version :10

Sequence 1:NP_001027444.1 Gene:Tcs1 / 3772640 FlyBaseID:FBgn0061361 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_068070130.1 Gene:yrdc / 797343 ZFINID:ZDB-GENE-070410-65 Length:278 Species:Danio rerio


Alignment Length:244 Identity:104/244 - (42%)
Similarity:149/244 - (61%) Gaps:17/244 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RRLQTSLYRLLRAHHTSSRMQHQASELRTPVCAVGDEAALQLARQCLLGGQVIALPTDTVYGLAC 66
            :.|:|.:.| :.::.:.....||........|.|          ..|..|||:|:||||:|||||
Zfish    46 KELKTRVLR-ISSNFSDDLTLHQPEWTEILSCTV----------NALKAGQVVAVPTDTIYGLAC 99

  Fly    67 DANNETAIQQLYEIKGRDEHKPVAICVHNIDALRRFGQAAHLSDELLTRLLPGPLTIVIERTSQL 131
            .|.|..||:::|:||||:..||:||||..|..:.::.:.: :.|.||..|||||:|:|:||::.|
Zfish   100 VAQNSEAIRRVYDIKGRNGDKPLAICVGEIHDIYKYCKVS-VKDRLLRDLLPGPVTLVLERSATL 163

  Fly   132 SNRFLNPSTSKIGIRIPDFNFMRDLCAVWQEKPLALTSANRSSAPSSLQVSEFRSLWPQLGAVFD 196
             |..|||.|..||:||||..|||.||.:. :.||||||||.|:..|::..:||..|||:|..|.|
Zfish   164 -NGDLNPFTKLIGVRIPDHPFMRRLCQMC-DTPLALTSANVSTQSSTVAANEFEDLWPRLAVVVD 226

  Fly   197 AGRIGLTEERRLASTVIDLATPGYYEIVRAGVALKPTLSLME-EFGIRE 244
            .|.|  .::.||.|||:||:..|.|.|:|.|.||..|:.::| .:|:.|
Zfish   227 GGPI--EDKSRLGSTVVDLSVCGRYRIIRPGCALSATVQILEGRYGLLE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tcs1NP_001027444.1 TsaC 37..228 CDD:439780 90/190 (47%)
yrdcXP_068070130.1 Sua5_yciO_yrdC 79..253 CDD:460153 89/178 (50%)

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