DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tcs1 and si:ch211-153b23.4

DIOPT Version :10

Sequence 1:NP_001027444.1 Gene:Tcs1 / 3772640 FlyBaseID:FBgn0061361 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001292402.2 Gene:si:ch211-153b23.4 / 335392 ZFINID:ZDB-GENE-030131-7332 Length:876 Species:Danio rerio


Alignment Length:246 Identity:59/246 - (23%)
Similarity:101/246 - (41%) Gaps:43/246 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 HTSSRMQ---HQASELRTPVCAVGDEAALQLARQCLLGGQVIALPTDTVYGLACDANNETAIQQL 77
            |.::|..   ||.:|:                   :..|.:..:||||||.|....|...|:::.
Zfish   601 HLTARKSTSVHQIAEI-------------------MKNGGICGMPTDTVYVLVAACNRPQAVEKA 646

  Fly    78 YEIKGRDEHKPVAICVHNI---DALRRFGQAAHLSDELLTRLLPGPLTIVIERTSQLSNRFLNPS 139
            |.:|.:.:.:|:::.|.:|   :.:|:  |.:.:..:.:....|..:::||.|...:....|..|
Zfish   647 YSVKKQAKERPMSLWVASIKQLEPVRK--QISPILWDFMEAAWPSSISLVIARAPWMEFFGLGDS 709

  Fly   140 TSKIG------IRIPDFNFMRDLC-AVWQEKPLALTSANRSSAPSSLQVSEFRSLWPQLGAVFDA 197
            :..||      ||.||......|. ||   .|:|:||||.:   .....:....::.:||...|.
Zfish   710 SKYIGTPQSIAIRNPDCTVATHLINAV---GPIAVTSANPT---GEADTTHHNQVYAKLGDKVDG 768

  Fly   198 GRIGLTEERRLASTVIDLA--TPGYYEIVRAGVALK-PTLSLMEEFGIREL 245
            ..........:||||:|..  ..|.....|.|:..| ..|.:.||...:.|
Zfish   769 VLCDGPSPENIASTVVDCTKIESGQIGFFRVGLIPKSKVLQIFEEIQKKHL 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tcs1NP_001027444.1 TsaC 37..228 CDD:439780 48/202 (24%)
si:ch211-153b23.4NP_001292402.2 None

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