DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His3:CG33848 and HTR12

DIOPT Version :10

Sequence 1:NP_001027358.1 Gene:His3:CG33848 / 3772619 FlyBaseID:FBgn0053848 Length:136 Species:Drosophila melanogaster
Sequence 2:NP_563627.1 Gene:HTR12 / 839104 AraportID:AT1G01370 Length:178 Species:Arabidopsis thaliana


Alignment Length:134 Identity:65/134 - (48%)
Similarity:85/134 - (63%) Gaps:8/134 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67
            :|..|...:||.:.     ..|.:|::.| .|..||.:|||||||||:|||.:||.|.|||....
plant    47 QTNPTTSPATGTRR-----GAKRSRQAMP-RGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAAS 105

  Fly    68 FQRLVREIAQDFKTDL--RFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 130
            |.|.||.|........  |:.:.|::|||||:|.||||||.|:.||||||:|||:|.||.:||||
plant   106 FIREVRSITHMLAPPQINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARR 170

  Fly   131 IRGE 134
            :.|:
plant   171 LGGK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His3:CG33848NP_001027358.1 PTZ00018 1..136 CDD:185400 65/134 (49%)
HTR12NP_563627.1 HFD_H3 78..173 CDD:467036 54/94 (57%)

Return to query results.
Submit another query.