DRSC/TRiP Functional Genomics Resources

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Protein Alignment His3:CG33848 and cnp1

DIOPT Version :10

Sequence 1:NP_001027358.1 Gene:His3:CG33848 / 3772619 FlyBaseID:FBgn0053848 Length:136 Species:Drosophila melanogaster
Sequence 2:NP_596473.1 Gene:cnp1 / 2539658 PomBaseID:SPBC1105.17 Length:120 Species:Schizosaccharomyces pombe


Alignment Length:118 Identity:76/118 - (64%)
Similarity:94/118 - (79%) Gaps:10/118 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ARKSAPATGG--VKKPH--RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQD----FKTD 82
            |:||..|..|  :.:|.  ||||||.||||||:||:||:|||::|||.|:||||:.:    |.||
pombe     2 AKKSLMAEPGDPIPRPRKKRYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTD 66

  Fly    83 --LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
              ||:||:|:..||||:||:||.||||||||||||||||||.:|:||||||||
pombe    67 VGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARRIRG 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His3:CG33848NP_001027358.1 PTZ00018 1..136 CDD:185400 76/118 (64%)
cnp1NP_596473.1 HFD_H3 20..119 CDD:467036 68/98 (69%)

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