DRSC/TRiP Functional Genomics Resources

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Protein Alignment His3:CG33848 and his-49

DIOPT Version :10

Sequence 1:NP_001027358.1 Gene:His3:CG33848 / 3772619 FlyBaseID:FBgn0053848 Length:136 Species:Drosophila melanogaster
Sequence 2:NP_505276.1 Gene:his-49 / 184113 WormBaseID:WBGene00001923 Length:136 Species:Caenorhabditis elegans


Alignment Length:207 Identity:44/207 - (21%)
Similarity:70/207 - (33%) Gaps:70/207 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 LKH--PRTPPTNASLDYPSADSEHVSKRTRPMGISDEVNLGVNMLPMSFSGQAHGHSPAFKAPDD 343
            |.|  |..|...|:..||...|::..   .|:.:|           .||:...:|..|.:.:.||
 Worm    97 LAHVPPPRPKRKAAHPYPQKASKNAQ---MPLQVS-----------TSFTTTRNGDMPGYASWDD 147

  Fly   344 LPKTVARTLSQGSSPMSMDFHPIKQTLLLVG--TNVGDIGLWEV--------GSRERLVQKTFKV 398
            ....:.|.:|           |..:...|.|  .::|..||..|        ||..|.|..:..|
 Worm   148 ASMLLNRVIS-----------PQHELATLRGAEADIGSKGLLNVSSPSTSGMGSSSRTVSGSEIV 201

  Fly   399 WDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGG---EDMRQHLEIDA 460
                        ...|:|.|            |.||.   ...::|::.|.   .:.|.|:|   
 Worm   202 ------------RKAKQPPV------------LHGVP---DFAEVYNFIGSVFDPETRGHVE--- 236

  Fly   461 HVGGVNDISFST 472
            .:..::.|:|.|
 Worm   237 KLKEMDPINFET 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His3:CG33848NP_001027358.1 PTZ00018 1..136 CDD:185400
his-49NP_505276.1 PTZ00018 1..136 CDD:185400 12/52 (23%)
Blue background indicates that the domain is not in the aligned region.

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