DRSC/TRiP Functional Genomics Resources

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Protein Alignment His3:CG33848 and cenpa

DIOPT Version :10

Sequence 1:NP_001027358.1 Gene:His3:CG33848 / 3772619 FlyBaseID:FBgn0053848 Length:136 Species:Drosophila melanogaster
Sequence 2:NP_001157712.1 Gene:cenpa / 100302659 -ID:- Length:145 Species:Danio rerio


Alignment Length:132 Identity:71/132 - (53%)
Similarity:92/132 - (69%) Gaps:1/132 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67
            |...|.|:.:...:......::..|.|.|:....:|.|::||||.||.|||:|||||.||:||.|
Zfish    10 RKPSTPRRRSPPASLPPPAGSRTRRHSGPSGSSPRKKHKFRPGTRALMEIRKYQKSTGLLLRKAP 74

  Fly    68 FQRLVREIAQDFKTD-LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 131
            |.|||||:.|.|..: :.:|..|:||||||:||::|.||.|.|||||||||||:.|:||||||||
Zfish    75 FSRLVREVCQMFSREHMMWQGYALMALQEAAEAFMVRLFSDANLCAIHAKRVTLFPRDIQLARRI 139

  Fly   132 RG 133
            ||
Zfish   140 RG 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His3:CG33848NP_001027358.1 PTZ00018 1..136 CDD:185400 71/132 (54%)
cenpaNP_001157712.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54 11/43 (26%)
HFD_H3 47..141 CDD:467036 62/93 (67%)
H3-like 51..145 62/91 (68%)

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