DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2A:CG33838 and macroh2a1

DIOPT Version :10

Sequence 1:NP_001027341.1 Gene:His2A:CG33838 / 3772618 FlyBaseID:FBgn0053838 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001035451.1 Gene:macroh2a1 / 678613 ZFINID:ZDB-GENE-060421-4796 Length:357 Species:Danio rerio


Alignment Length:123 Identity:78/123 - (63%)
Similarity:91/123 - (73%) Gaps:2/123 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLEL 65
            ||.|  |||.|....|||.|||:.|||||:.|..|:|....|:..|||||:|||:|||.||:|||
Zfish     1 MSSR--GGKKKVSRGSRSARAGVIFPVGRMLRFFRRGLPKYRISVGAPVYMAAVLEYLTAEILEL 63

  Fly    66 AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
            ||||||||||.|:.|||:.|||.|||||::||.||||:.|||||||...||.||.|.:
Zfish    64 AGNAARDNKKGRVTPRHILLAIANDEELHQLLRGVTISAGGVLPNIHPELLAKKRESR 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG33838NP_001027341.1 PTZ00017 16..124 CDD:185399 71/108 (66%)
macroh2a1NP_001035451.1 H2A 14..119 CDD:197711 70/104 (67%)
Macro_H2A-like 166..353 CDD:394875
Blue background indicates that the domain is not in the aligned region.

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