DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2A:CG33838 and H2al2c

DIOPT Version :10

Sequence 1:NP_001027341.1 Gene:His2A:CG33838 / 3772618 FlyBaseID:FBgn0053838 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001171040.1 Gene:H2al2c / 547210 MGIID:3779546 Length:111 Species:Mus musculus


Alignment Length:106 Identity:39/106 - (36%)
Similarity:57/106 - (53%) Gaps:10/106 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIP 80
            :.|.||.|||||.|:.|.|.:|.|:.|:.:.|.|:|..|:|||...:|.|||.....:...||.|
Mouse    14 THSQRAELQFPVSRVDRFLGEGIYSRRLSSSALVFLVGVLEYLTPNILGLAGEVTHTSGMKRIAP 78

  Fly    81 RHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
            .|:...::|.|:|::|..     |||.     :|..|.:.|
Mouse    79 EHVCQVVQNKEQLHQLFK-----QGGT-----SVFEPPEPE 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG33838NP_001027341.1 PTZ00017 16..124 CDD:185399 39/106 (37%)
H2al2cNP_001171040.1 HFD_H2A 14..96 CDD:467020 33/81 (41%)

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