DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2A:CG33838 and H2AB1

DIOPT Version :10

Sequence 1:NP_001027341.1 Gene:His2A:CG33838 / 3772618 FlyBaseID:FBgn0053838 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001017990.1 Gene:H2AB1 / 474382 HGNCID:22516 Length:115 Species:Homo sapiens


Alignment Length:100 Identity:47/100 - (47%)
Similarity:67/100 - (67%) Gaps:2/100 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNA 69
            |.||  :|:..||:.||.|.|.|.::.|.||:|:||:|:...||||||||:|||.|:|.|||||.
Human    12 GAGG--RGRTCSRTVRAELSFSVSQVERSLREGHYAQRLSRTAPVYLAAVIEYLTAKVPELAGNE 74

  Fly    70 ARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQ 104
            |:::.:..|.|..|.:.:.||..|:.|.:..||:|
Human    75 AQNSGERNITPLLLDMVVHNDRLLSTLFNTTTISQ 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG33838NP_001027341.1 PTZ00017 16..124 CDD:185399 42/88 (48%)
H2AB1NP_001017990.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 4/10 (40%)
H2A 21..113 CDD:197711 42/88 (48%)
Docking domain. /evidence=ECO:0000269|PubMed:15257289 87..115 7/22 (32%)

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