DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr59f and TEF4

DIOPT Version :10

Sequence 1:NP_788432.1 Gene:Gr59f / 37726 FlyBaseID:FBgn0041234 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_012842.1 Gene:TEF4 / 853781 SGDID:S000001564 Length:412 Species:Saccharomyces cerevisiae


Alignment Length:153 Identity:36/153 - (23%)
Similarity:49/153 - (32%) Gaps:51/153 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 SISFAQYYLLLQGIAW---RQRRLTEGL------------ERELTHLHSPRISEVQKIRMHHANL 246
            |..||..:.|.|..|:   :..:|||.|            |:|...|....:.|..:| :..|:|
Yeast    36 SSEFASLFPLKQAPAFLGPKGLKLTEALAIQFYLANQVADEKERARLLGSDVIEKSQI-LRWASL 99

  Fly   247 I--DFTKAVNRTFQYSILLLFVG-----------CFLNF-NLVLFL-------VYQGIENPSMAD 290
            .  |....:.|.|     |.|.|           ||:.. ||....       .:...||.|:.|
Yeast   100 ANSDVMSNIARPF-----LSFKGLIPYNKKDVDACFVKIDNLAAVFDARLRDYTFVATENISLGD 159

  Fly   291 F---TKWVCMLL------WLAMH 304
            .   ..|...|.      |.|.|
Yeast   160 LHAAGSWAFGLATILGPEWRAKH 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59fNP_788432.1 7tm_7 61..388 CDD:473258 36/153 (24%)
TEF4NP_012842.1 GST_N_EF1Bgamma 4..72 CDD:239342 10/35 (29%)
GST_C_EF1Bgamma_like 89..211 CDD:198290 23/100 (23%)
EF1G 253..356 CDD:459888
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.