DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr59f and Vars1

DIOPT Version :10

Sequence 1:NP_788432.1 Gene:Gr59f / 37726 FlyBaseID:FBgn0041234 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_035820.3 Gene:Vars1 / 22321 MGIID:90675 Length:1263 Species:Mus musculus


Alignment Length:303 Identity:63/303 - (20%)
Similarity:97/303 - (32%) Gaps:96/303 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RSSATKG--AKLKNSPRERLSSFNPQ---YAERYKELYRTLF---WLLLISVLANTAPITILPG- 57
            |..|.|.  |.||.....|....||.   ...|.|::...|.   |.:....:|..|...:..| 
Mouse   632 RFEARKAVLAALKERGLFRGVKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGD 696

  Fly    58 ---CPNRFYRLVHLSWM----------ILWYG-----LFVL-------------GSYW------- 84
               .|....|..| |||          .||:|     .|:.             |.||       
Mouse   697 LRILPEAHQRTWH-SWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEA 760

  Fly    85 --------EFVLVTTQRVSLDRYLNAIE----SAIYVVHIFSIMLLTWQCRNWAPKLMTNIVTSD 137
                    ||. |:..::||.:..:.::    |.::...||.     |.  |.:..|......:.
Mouse   761 EAREKAAREFG-VSPDKISLQQDEDVLDTWFSSGLFPFSIFG-----WP--NQSEDLSVFYPGTL 817

  Fly   138 LNRAYTIDCNRTKRFIRLQLFLVGIFACLAIFFNIWTHKFV----VYRSILSINSYVMP-NIISS 197
            |...:.|......|.:.|.|.|.|...    |..::.|..|    ..:...|:.:.:.| ::|..
Mouse   818 LETGHDILFFWVARMVMLGLKLTGKLP----FREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHG 878

  Fly   198 ISFAQYYLLLQGIAWRQRRLTEGLERELTHLHSPRISEVQKIR 240
            :|       |||:  ..:.|...|:.          |||:|.:
Mouse   879 VS-------LQGL--YDQLLNSNLDP----------SEVEKAK 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59fNP_788432.1 7tm_7 61..388 CDD:473258 46/232 (20%)
Vars1NP_035820.3 GST_C_family 92..213 CDD:470672
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..294
PTZ00419 281..1263 CDD:240411 63/303 (21%)
'HIGH' region 343..353
'KMSKS' region 861..865 0/3 (0%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.