DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr59f and lite-1

DIOPT Version :10

Sequence 1:NP_788432.1 Gene:Gr59f / 37726 FlyBaseID:FBgn0041234 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:413 Identity:74/413 - (17%)
Similarity:146/413 - (35%) Gaps:116/413 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LYRTLFW----LLLISVLANTAPITILPGCP----NRFY-----------RLVHLSWMILWYGLF 78
            |:|...|    |||.:.|.....:.:.|...    ..|:           .|:.||.::....|:
 Worm    71 LFRIYSWLVFCLLLFTTLRKFNQVGVRPNGTRENLQEFFANPRSMITLCNALIMLSGLLASLQLY 135

  Fly    79 VLGS--------YWEFVL-VTTQRVSLDRYLNAIESAIYVVHIFSIMLLTWQCRNW--------A 126
            .||:        ..:|.| |.|::....:::.....|::...:...|..|:....|        .
 Worm   136 TLGAKRLKPLKILCQFSLNVRTKQAERRQFMINTFLAVFSGLLALTMAATYAMSKWGYILYIVGT 200

  Fly   127 PKLMTNIVTSDLNRAYTIDCNRTKRFIRLQLFLVGIFACLAIFFNIWTHKFVVYRSILSINSYVM 191
            |.|.|..:...|..:|.:..:|            ...:.|||.|  :.|..|:.|||..:.:.::
 Worm   201 PNLDTETIFCVLLDSYALFVSR------------AAISALAILF--YQHCSVIRRSIKHLINEMV 251

  Fly   192 PNIISSISFAQYYLLLQGIAWRQRRLTEGLERELTHLHSPRISEVQKIRMHHANLIDFTKAVNRT 256
            |                            .|::...|....:.::...::.:..:.: .|||.. 
 Worm   252 P----------------------------AEQDECPLPESSLQKIHDCQISYQRIFN-GKAVIE- 286

  Fly   257 FQYSILLLFVGCFLNFNLVLFLVYQGIENPSMADFTKWVCMLLWLAMHVGKVCSILHFN------ 315
             :|...:||....:...:..||::.|:...|:. :::.|.:::|:   |..:..:|.|:      
 Worm   287 -EYYSFVLFYSYGVCIPIFCFLMFVGMSAQSIC-WSEVVSIVIWI---VNAILVLLLFSLPAFMI 346

  Fly   316 ---------QSIQNEHSTC-----LTLLSRVSYARKDIQDTITHFIIQMRTNVRQHVVCGVINLD 366
                     .|.:..|.|.     ||:||:           :|.|..|:.:.......|....:|
 Worm   347 NEDGDRLVASSFRMYHETFHEERDLTVLSQ-----------MTFFTFQIHSTKLTLSACNYFYMD 400

  Fly   367 LKFLTTLLVASADFFIFLLQYDV 389
            ...|.:|..|...:|:.|.::|:
 Worm   401 RSILLSLFSAILTYFLILWEFDI 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59fNP_788432.1 7tm_7 61..388 CDD:473258 65/374 (17%)
lite-1NP_509043.3 7tm_7 75..425 CDD:462463 72/409 (18%)

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