DRSC/TRiP Functional Genomics Resources

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Protein Alignment gdl and dgcr6

DIOPT Version :9

Sequence 1:NP_001027127.1 Gene:gdl / 3772583 FlyBaseID:FBgn0001099 Length:194 Species:Drosophila melanogaster
Sequence 2:NP_991302.1 Gene:dgcr6 / 403055 ZFINID:ZDB-GENE-040912-125 Length:197 Species:Danio rerio


Alignment Length:171 Identity:60/171 - (35%)
Similarity:102/171 - (59%) Gaps:13/171 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QRKIYFLVDQLRTYHSELPENLQTRISYDLLTELANCVLNDGIFVIVKALMELQHETERHLIKIR 94
            |.:.|:|:.:|:|...:|..:.|.|:||..|::||..:::..::.||:.|:::||.||::|...|
Zfish    18 QERHYYLLSELQTLVKDLSSSFQQRLSYTTLSDLAQALIDGTVYEIVQGLLDIQHLTEKNLYNQR 82

  Fly    95 MQAENEYEIEVAEWRSKIKDPEEL--RHILGLMKIK---HTKKLHE--------SDTKIIEILDQ 146
            .:..:|:.....:...|.|...:.  .|.|.::|..   .|:.|.:        .|.||:..:||
Zfish    83 QKLHSEHRGLKQDLIRKHKQALQACKSHNLSVLKTNQRAETEALDQRVKDEQRMMDEKIVAEMDQ 147

  Fly   147 KVNDQQSTLQKAGVPGFYVTENPKEIKIQMFLLDFILRLSR 187
            ||.|||:||:||||||||:|.||:|:.:||.||:.:|:|.:
Zfish   148 KVLDQQNTLEKAGVPGFYITSNPQEVMMQMNLLELVLKLQQ 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gdlNP_001027127.1 DGCR6 29..194 CDD:284689 60/171 (35%)
dgcr6NP_991302.1 DGCR6 10..194 CDD:284689 60/171 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578002
Domainoid 1 1.000 106 1.000 Domainoid score I6560
eggNOG 1 0.900 - - E1_KOG4810
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 105 1.000 Inparanoid score I4917
OMA 1 1.010 - - QHG48814
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007511
OrthoInspector 1 1.000 - - oto39628
orthoMCL 1 0.900 - - OOG6_106863
Panther 1 1.100 - - LDO PTHR13054
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10740
SonicParanoid 1 1.000 - - X5642
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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