DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gdl and dgcr6

DIOPT Version :10

Sequence 1:NP_001027127.1 Gene:gdl / 3772583 FlyBaseID:FBgn0001099 Length:194 Species:Drosophila melanogaster
Sequence 2:NP_991302.1 Gene:dgcr6 / 403055 ZFINID:ZDB-GENE-040912-125 Length:197 Species:Danio rerio


Alignment Length:173 Identity:59/173 - (34%)
Similarity:103/173 - (59%) Gaps:17/173 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QRKIYFLVDQLRTYHSELPENLQTRISYDLLTELANCVLNDGIFVIVKALMELQHETERHLIKIR 94
            |.:.|:|:.:|:|...:|..:.|.|:||..|::||..:::..::.||:.|:::||.||::|...|
Zfish    18 QERHYYLLSELQTLVKDLSSSFQQRLSYTTLSDLAQALIDGTVYEIVQGLLDIQHLTEKNLYNQR 82

  Fly    95 MQAENEYEIEVAEWRSKIKDPEEL--RHILGLMK-------------IKHTKKLHESDTKIIEIL 144
            .:..:|:.....:...|.|...:.  .|.|.::|             :|..:::  .|.||:..:
Zfish    83 QKLHSEHRGLKQDLIRKHKQALQACKSHNLSVLKTNQRAETEALDQRVKDEQRM--MDEKIVAEM 145

  Fly   145 DQKVNDQQSTLQKAGVPGFYVTENPKEIKIQMFLLDFILRLSR 187
            ||||.|||:||:||||||||:|.||:|:.:||.||:.:|:|.:
Zfish   146 DQKVLDQQNTLEKAGVPGFYITSNPQEVMMQMNLLELVLKLQQ 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gdlNP_001027127.1 DGCR6 2..194 CDD:480729 59/173 (34%)
dgcr6NP_991302.1 DGCR6 5..194 CDD:462145 59/173 (34%)

Return to query results.
Submit another query.