DRSC/TRiP Functional Genomics Resources

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Protein Alignment gdl and Dgcr6

DIOPT Version :10

Sequence 1:NP_001027127.1 Gene:gdl / 3772583 FlyBaseID:FBgn0001099 Length:194 Species:Drosophila melanogaster
Sequence 2:XP_006248671.1 Gene:Dgcr6 / 303794 RGDID:1309390 Length:201 Species:Rattus norvegicus


Alignment Length:181 Identity:67/181 - (37%)
Similarity:105/181 - (58%) Gaps:16/181 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QRKIYFLVDQLRTYHSELPENLQTRISYDLLTELANCVLNDGIFVIVKALMELQHETERHLIKIR 94
            |.:.|.|:..|::...|||.:.|.|:||..|::||..:|:..:|.||:.|:|:||.||:.|...|
  Rat    18 QERHYQLLSALQSLVKELPSSFQQRLSYTTLSDLALALLDGTVFEIVQGLLEIQHLTEKSLYNQR 82

  Fly    95 MQAENEYEIEVAEWRSK-IKDPEELR-HILGLMKIKHTKKL--------------HESDTKIIEI 143
            ::.:||:.:.....|.| ::..:..| |.|.:::....::|              ...|.||:..
  Rat    83 LRLQNEHRVLRQTLRQKHLEAQQSCRPHNLPVLQAAQQRELEPWQALEHRIREEQQAMDRKIVLE 147

  Fly   144 LDQKVNDQQSTLQKAGVPGFYVTENPKEIKIQMFLLDFILRLSRLKYEPGK 194
            ||:||.||||||:||||.|||||.||:|:.:||.||:.|.:|.:...:.||
  Rat   148 LDRKVADQQSTLEKAGVAGFYVTTNPQELTLQMNLLELIRKLQQRGCQMGK 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gdlNP_001027127.1 DGCR6 2..194 CDD:480729 65/179 (36%)
Dgcr6XP_006248671.1 DGCR6 2..198 CDD:462145 65/179 (36%)

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