DRSC/TRiP Functional Genomics Resources

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Protein Alignment gdl and Dgcr6

DIOPT Version :9

Sequence 1:NP_001027127.1 Gene:gdl / 3772583 FlyBaseID:FBgn0001099 Length:194 Species:Drosophila melanogaster
Sequence 2:NP_001276742.1 Gene:Dgcr6 / 13353 MGIID:1202877 Length:201 Species:Mus musculus


Alignment Length:181 Identity:67/181 - (37%)
Similarity:105/181 - (58%) Gaps:16/181 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QRKIYFLVDQLRTYHSELPENLQTRISYDLLTELANCVLNDGIFVIVKALMELQHETERHLIKIR 94
            |.:.|.|:..|::...|||.:.|.|:||..|::||..:|:..:|.||:.|:|:||.||:.|...|
Mouse    18 QERHYQLLSALQSLVKELPSSFQQRLSYTTLSDLALALLDGTVFEIVQGLLEIQHLTEKSLYNQR 82

  Fly    95 MQAENEYEIEVAEWRSK-IKDPEELR-HILGLMKIKHTKKLHE--------------SDTKIIEI 143
            ::.:||:.:.....|.| ::..:..| |.|.:::....::|..              .|.||:..
Mouse    83 LRLQNEHRVLRQTLRQKHLEAQQSCRPHNLPVLQAAQQRELESWQAMEHRIREEQQAMDRKIVLE 147

  Fly   144 LDQKVNDQQSTLQKAGVPGFYVTENPKEIKIQMFLLDFILRLSRLKYEPGK 194
            ||:||.||||||:||||.|||||.||:|:.:||.||:.|.:|.:...:.||
Mouse   148 LDRKVADQQSTLEKAGVAGFYVTTNPQELTLQMNLLELIRKLQQRGCQVGK 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gdlNP_001027127.1 DGCR6 29..194 CDD:284689 65/179 (36%)
Dgcr6NP_001276742.1 DGCR6 9..198 CDD:284689 65/179 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834930
Domainoid 1 1.000 111 1.000 Domainoid score I6287
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4152
Inparanoid 1 1.050 111 1.000 Inparanoid score I4867
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48814
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007511
OrthoInspector 1 1.000 - - oto93302
orthoMCL 1 0.900 - - OOG6_106863
Panther 1 1.100 - - LDO PTHR13054
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10740
SonicParanoid 1 1.000 - - X5642
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.930

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