DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13430 and CG17571

DIOPT Version :9

Sequence 1:NP_001027441.1 Gene:CG13430 / 3772580 FlyBaseID:FBgn0034518 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001286096.1 Gene:CG17571 / 35409 FlyBaseID:FBgn0259998 Length:258 Species:Drosophila melanogaster


Alignment Length:245 Identity:94/245 - (38%)
Similarity:137/245 - (55%) Gaps:23/245 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GRIVGGWETHITFFPHQVSLQL--GTRHACGGTIISPNIILTAAHCVLEYSKPQYYVIRAGSSDW 92
            ||||.|.:..|..:|:|||:|.  |: |.|||::|....:||||||:..|:..:..| |.||:..
  Fly    29 GRIVNGEDVDIENYPYQVSVQTTKGS-HFCGGSLIDSETVLTAAHCMQSYAASELQV-RVGSTSR 91

  Fly    93 TKGGSYIRVKKIIPHPEFHDPTRMNNDIAIVQLQQPLVYSQDIRPISLATSKDIIMPTAQLFVSG 157
            :.||..:.|:....| |.::...|.||:||::|..|:..:..||.|.||.|:.:....|  .|||
  Fly    92 SSGGEVVTVRAFKYH-EGYNSKLMINDVAIIKLSSPVRQTSKIRAIELADSEAVSGTNA--VVSG 153

  Fly   158 WGSTSI---SQMQPEKRLRYTVVHLRDQNQCAR---NYFGAGTVTNTMFCAGTQAGGRDSCQGDS 216
            ||:|..   |.....:::...::|.:|   ||.   || |:.::..||.||..:.  :|:|||||
  Fly   154 WGTTCFLFCSSPDTLQKVEVDLLHYKD---CAADTYNY-GSDSILETMVCATGEK--KDACQGDS 212

  Fly   217 GGPLVTSIDGRLKLYGIVSWGFGCANAMFPGIYTKVSAYDDWIAQTIEEL 266
            |||||..    .||.|:||||.|||...:||:|..|::...||..|.:.|
  Fly   213 GGPLVAD----NKLVGVVSWGSGCAWTGYPGVYADVASLRSWIVDTTDSL 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13430NP_001027441.1 Tryp_SPc 31..259 CDD:214473 89/235 (38%)
Tryp_SPc 32..262 CDD:238113 90/237 (38%)
CG17571NP_001286096.1 Tryp_SPc 30..251 CDD:214473 89/235 (38%)
Tryp_SPc 31..254 CDD:238113 90/237 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443262
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.