DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13430 and CG4271

DIOPT Version :10

Sequence 1:NP_001027441.1 Gene:CG13430 / 3772580 FlyBaseID:FBgn0034518 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_608665.1 Gene:CG4271 / 33410 FlyBaseID:FBgn0031409 Length:242 Species:Drosophila melanogaster


Alignment Length:240 Identity:79/240 - (32%)
Similarity:119/240 - (49%) Gaps:23/240 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IVGGWETHITFFPHQVSLQLGTRHACGGTIISPNIILTAAHCVLEYSKP-QYYVIRAGSSDWTKG 95
            |..|.|....|:....|:.:...|.|||.:|...|:||||.||  .:|| :...:|.|:.|..:|
  Fly    19 IYNGVEAKFDFWTFLASVWVSGYHECGGAVIDSRIVLTAAQCV--KNKPVKRITVRVGTPDIYRG 81

  Fly    96 GSYIRVKKIIPHPEFHDPTRMNNDIAIVQLQQPLVYSQDIRPISLATSKDIIMPTAQLFVS--GW 158
            |..|||..::.|..:.:   .:||||::.|::| |.|..:..|.|||.:    |:...:.|  ||
  Fly    82 GRIIRVTALVVHENYKN---WDNDIALLWLEKP-VLSVRVTKIPLATKE----PSENEYPSNAGW 138

  Fly   159 GSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCA-GTQAGGRDSCQGDSGGPLVT 222
            |...:......::|:..|..:|.::.||...  ...|...:.|| .|:   .|.|.||.|||||.
  Fly   139 GEKLLESYVVTRKLQNGVTKIRPRSMCAEEL--VEPVGEELLCAFYTE---NDICPGDYGGPLVL 198

  Fly   223 SIDGRLKLYGIVSWGFGCANAMFPGIYTKVSAYDDWIAQTIEELV 267
            :    .|:.||...|.||..|:.|.:||.|..|.:||.:..|:|:
  Fly   199 A----NKVVGIAVQGHGCGFAVLPSLYTNVFHYLEWIEENAEKLI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13430NP_001027441.1 Tryp_SPc 31..259 CDD:214473 75/230 (33%)
CG4271NP_608665.1 Tryp_SPc 19..234 CDD:238113 77/233 (33%)

Return to query results.
Submit another query.