DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13430 and Cela3b

DIOPT Version :10

Sequence 1:NP_001027441.1 Gene:CG13430 / 3772580 FlyBaseID:FBgn0034518 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001100162.1 Gene:Cela3b / 298567 RGDID:1307819 Length:269 Species:Rattus norvegicus


Alignment Length:275 Identity:81/275 - (29%)
Similarity:139/275 - (50%) Gaps:29/275 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RLAVALWLICTSAAQNSTDVEQDGRIVGGWETHITFFPHQVSLQL----GTRHACGGTIISPNII 67
            ||..:|.|:..::...........|:|.|.:.....:|.|||||.    ...|.||||:|:|:.:
  Rat     3 RLLCSLLLVALASGCGQPSYNPSSRVVNGEDAVPYSWPWQVSLQYEKDGSFHHTCGGTLIAPDWV 67

  Fly    68 LTAAHCVLEYSKPQYYVIRAGSSDWTKGGSYIRVKKIIP--------HPEFH-DPTRMNNDIAIV 123
            :||.||:   |..:.|.:..|..:   .|.....:::||        ||::: :.....||||:|
  Rat    68 MTAGHCI---STSRTYQVVLGEFE---RGVEEGPEQVIPVNAGDLFVHPKWNSNCVSCGNDIALV 126

  Fly   124 QLQQPLVYSQDIRPISLATSKDIIMPTAQLFVSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARN 188
            :|.:.......::...|..:.:|:...|..::||||..|.:...|:| |:..::.:.|...|::.
  Rat   127 KLSRSAQLGDTVQLACLPPAGEILPNGAPCYISGWGRLSTNGPLPDK-LQQALLPVVDYAHCSKW 190

  Fly   189 YFGAGTVTNTMFCAG--TQAGGRDSCQGDSGGPL-VTSIDGRLKLYGIVSW--GFGCANAMFPGI 248
            .:...:|..||.|||  .|:|    |.||||||| ..:.:|..:::|:.|:  ..||.....|.:
  Rat   191 DWWGFSVKKTMVCAGGDIQSG----CNGDSGGPLNCPAENGTWQVHGVTSFVSSLGCNTLKKPTV 251

  Fly   249 YTKVSAYDDWIAQTI 263
            :|:|||:::||.:||
  Rat   252 FTRVSAFNEWIEETI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13430NP_001027441.1 Tryp_SPc 31..259 CDD:214473 73/245 (30%)
Cela3bNP_001100162.1 Tryp_SPc 28..265 CDD:238113 74/247 (30%)

Return to query results.
Submit another query.