DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13430 and gzm3.4

DIOPT Version :9

Sequence 1:NP_001027441.1 Gene:CG13430 / 3772580 FlyBaseID:FBgn0034518 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001108167.1 Gene:gzm3.4 / 100001210 ZFINID:ZDB-GENE-070912-136 Length:251 Species:Danio rerio


Alignment Length:245 Identity:67/245 - (27%)
Similarity:113/245 - (46%) Gaps:30/245 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IVGGWETHITFFPHQVSLQLGTRHACGGTIISPNIILTAAHCVLEYSKPQYYVIRAGSSDWTKGG 96
            ||||.|..:...|:..|||:..:|.|||.:|..:.:||:|||..:.:..:..:.....|......
Zfish    25 IVGGREVKLHSRPYMASLQVQRKHNCGGILIKEDYVLTSAHCWKDTTNLEVVLGAHNISQRENSQ 89

  Fly    97 SYIRVKKIIPHPEFHDPTRMNN--DIAIVQLQQPLVYSQDIRPISLATSKDIIMPTAQLFVSGWG 159
            ..|:|:|.|.||.:.   :.|:  ||.:::|:...|.:..:...:|...:..|:...:..::|||
Zfish    90 QIIQVQKYIKHPNYQ---KKNHSFDIMLLKLKTKAVLNHFVNITNLPKHEPSILAPVECSIAGWG 151

  Fly   160 STSISQMQ-----PEKRLRYTVVHLRDQNQCARN---YFGAGTVTNTMFCAGTQAGGRDSCQGDS 216
                  ||     ....||...:.|...:.|...   ||.    :..|.|..:. |.:..|||||
Zfish   152 ------MQRPGEGASNVLREVNLQLESNSYCKSKWQVYFN----SKNMVCTASD-GKKAFCQGDS 205

  Fly   217 GGPLVTSIDGRLKLYGIVSWGF--GCANAMFPGIYTKVSAYDDWIAQTIE 264
            |.||..:.:    |||:.::.:  .|....:|.:|.||||:..||.:.::
Zfish   206 GSPLFCNSE----LYGMAAYTYPNNCTFKEYPEVYMKVSAFLPWIKKNMK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13430NP_001027441.1 Tryp_SPc 31..259 CDD:214473 65/238 (27%)
Tryp_SPc 32..262 CDD:238113 67/241 (28%)
gzm3.4NP_001108167.1 Tryp_SPc 25..249 CDD:238113 67/241 (28%)
Tryp_SPc 25..246 CDD:214473 65/238 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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