DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp22 and AT1G54050

DIOPT Version :9

Sequence 1:NP_001027114.1 Gene:Hsp22 / 3772576 FlyBaseID:FBgn0001223 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001323264.1 Gene:AT1G54050 / 841843 AraportID:AT1G54050 Length:155 Species:Arabidopsis thaliana


Alignment Length:94 Identity:25/94 - (26%)
Similarity:46/94 - (48%) Gaps:18/94 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 YKLTLDVK--DYSELKVKVLDESVVLVEG----KSEQQEAEQGGYSSR-------HFLRRFVLPE 115
            |...||:.  ..|:::|.|.:|..::::.    |.:..|:|:|....|       :.:::|.|||
plant    53 YIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLERRLAQNLVKKFRLPE 117

  Fly   116 GYEADKVTSTLSSDGVLTISV----PNPP 140
            ..:...||:.. .:||||:.:    |.||
plant   118 DADMASVTAKY-QEGVLTVVIKKLPPQPP 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp22NP_001027114.1 IbpA 17..154 CDD:223149 25/94 (27%)
metazoan_ACD 61..138 CDD:107247 22/90 (24%)
AT1G54050NP_001323264.1 ACD_sHsps-like 45..137 CDD:107221 22/84 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 56 1.000 Inparanoid score I2586
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.