DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2B:CG33884 and H2bc1

DIOPT Version :10

Sequence 1:NP_001027345.1 Gene:His2B:CG33884 / 3772575 FlyBaseID:FBgn0053884 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_072169.1 Gene:H2bc1 / 24829 RGDID:3855 Length:127 Species:Rattus norvegicus


Alignment Length:128 Identity:104/128 - (81%)
Similarity:109/128 - (85%) Gaps:9/128 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PKTSGKA---AKKAGKAQKNITKTDKKKKRKRK----ESYAIYIYKVLKQVHPDTGISSKAMSIM 60
            |:.|.|.   :||..|  |.:|||.||:.||||    |||:||||||||||||||||||||||||
  Rat     2 PEVSAKGTTISKKGFK--KAVTKTQKKEGRKRKRCREESYSIYIYKVLKQVHPDTGISSKAMSIM 64

  Fly    61 NSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
            ||||.|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    65 NSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG33884NP_001027345.1 HFD_H2B 33..120 CDD:467035 83/86 (97%)
H2bc1NP_072169.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 14/31 (45%)
HFD_H2B 31..124 CDD:467035 85/92 (92%)

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