DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fuca and fuca1

DIOPT Version :9

Sequence 1:NP_001303363.1 Gene:Fuca / 3772574 FlyBaseID:FBgn0285958 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001015860.1 Gene:fuca1 / 548577 XenbaseID:XB-GENE-5940579 Length:459 Species:Xenopus tropicalis


Alignment Length:449 Identity:212/449 - (47%)
Similarity:289/449 - (64%) Gaps:34/449 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VPGPRTRYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQ 91
            :|...:||.|||.|||.||||.|:|:||.|||||:||:|||||||||||.||.. |:..||:||:
 Frog    24 LPSGSSRYTPNWESLDARPLPPWFDEAKFGIFLHWGVFSVPSFGSEWFWWNWHE-RSDAYVKFME 87

  Fly    92 RNYKPDFTYQEFASQFTAELFNATKWALLFKDSGARYVVLTSKHHDGFTLWPSKNSYGWNSMDVG 156
            :||:|.|||.:||.|||||.::...||.||:.:||:|||||:|||:|||.|.|..|:.||::|||
 Frog    88 QNYRPGFTYADFAPQFTAEFYDPDAWAQLFQAAGAKYVVLTTKHHEGFTNWGSPVSWNWNAVDVG 152

  Fly   157 PKRDIVKELAAAIRKESDLRFGLYYSLFEWFNPLWTDDKLHLLMQQHFVERKVRPEQMELVQQYL 221
            |.||:|.:.:.|:||. :|..|||:||.|||:||:..||.:....|:||..|..||..:||.:|.
 Frog   153 PHRDLVGDFSDALRKR-NLSVGLYHSLLEWFHPLYLLDKKNGFKTQYFVFSKTMPELYDLVNRYK 216

  Fly   222 PEIIWSDGDWEAPAKYWRSEEFIAWLYNDSPVRDTVVTNDRWGFGTACMHGDFYNCADRFNPGVL 286
            |::||||||||:|..||.|.:|:|||||||||:|.:|.|||||...:|.||.:|||||:|.|..|
 Frog   217 PDLIWSDGDWESPDTYWNSTDFLAWLYNDSPVKDNIVVNDRWGSNCSCYHGGYYNCADKFTPSSL 281

  Fly   287 QAHKWENAFTLDRTSWGQRFDVSLSDFMTSKEVIKEIITTVSCNGNVLINVGPTKFGTILPIFEE 351
            ..||||...::|..|||.|.::.::..|:.:.:|.|::.|||..||.|:||||:|.|.|:|||:|
 Frog   282 PTHKWEKCTSVDTYSWGYRRNMQVNQIMSERNIIAELVETVSFGGNYLLNVGPSKEGLIVPIFQE 346

  Fly   352 RLRDMGRWLKFNGEGIYGSVPWIYQNDTINGNVWYTRQKEASNGKITIYAFVLEYPYDTNELDIY 416
            ||..:|:|||.|||.||.|.||..|.:..:..:|||     |.|. ::|:..:.:| :.|.|.:.
 Frog   347 RLLAVGKWLKINGEAIYASKPWRVQKENSSVTIWYT-----SKGS-SVYSIFMSWP-ENNTLKLQ 404

  Fly   417 PLGKDINIFRNVMLTGIDMGTGGDILNEQSTEVVMLGMEDTKIKWNADHN-RLHIVFPP 474
                                   ...:...|.|.:|||.. ::.|....: .|.:..||
 Frog   405 -----------------------SPKSTSQTTVTLLGMSG-QLTWKQSPDLGLIVSLPP 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FucaNP_001303363.1 Alpha_L_fucos 28..409 CDD:214829 201/380 (53%)
AfuC 60..>373 CDD:226195 170/312 (54%)
Fucosidase_C 376..492 CDD:293362 19/100 (19%)
fuca1NP_001015860.1 Alpha_L_fucos 25..406 CDD:214829 203/412 (49%)
Fucosidase_C 371..456 CDD:374779 19/100 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 458 1.000 Domainoid score I487
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 496 1.000 Inparanoid score I1352
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002668
OrthoInspector 1 1.000 - - otm49296
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1781
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.050

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