DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fuca and fuca1.1

DIOPT Version :9

Sequence 1:NP_001303363.1 Gene:Fuca / 3772574 FlyBaseID:FBgn0285958 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_997905.1 Gene:fuca1.1 / 335494 ZFINID:ZDB-GENE-030131-7434 Length:451 Species:Danio rerio


Alignment Length:495 Identity:228/495 - (46%)
Similarity:297/495 - (60%) Gaps:61/495 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ISAWMPLLVALIVVWISAAEVDAQVPGPRTRYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVP 67
            ||.::.||..:.|:              ..||.|:|.|||.||||.|||:.|.|||:|:||:|||
Zfish     8 ISLFLCLLSCVSVI--------------GARYTPDWTSLDSRPLPGWYDEVKFGIFVHWGVFSVP 58

  Fly    68 SFGSEWFWTNWKNLRNPEYVQFMQRNYKPDFTYQEFASQFTAELFNATKWALLFKDSGARYVVLT 132
            :|||||||..||..:||:|||||.:||.|.|:|.:||..|.|:.|:...||.:|:.|||:|||||
Zfish    59 AFGSEWFWWYWKGAQNPDYVQFMIKNYPPGFSYADFAPNFHAQFFDPDAWADIFEASGAKYVVLT 123

  Fly   133 SKHHDGFTLWPSKNSYGWNSMDVGPKRDIVKELAAAIRKESDLRFGLYYSLFEWFNPLWTDDKLH 197
            ||||:|||.|.|..|:.|||:|.||.||:|.:|..||||:. |.:|||:||:||||||:..||..
Zfish   124 SKHHEGFTNWGSPTSWNWNSVDDGPHRDLVGDLGNAIRKKG-LHYGLYHSLYEWFNPLYLSDKQS 187

  Fly   198 LLMQQHFVERKVRPEQMELVQQYLPEIIWSDGDWEAPAKYWRSEEFIAWLYNDSPVRDTVVTNDR 262
            ....|.:|.||..||..:||.:|.|::||||||||||..||.|.||:|||||||||:|.||.|||
Zfish   188 GFKTQEYVARKAMPELYDLVSRYKPDLIWSDGDWEAPDTYWNSTEFLAWLYNDSPVKDIVVVNDR 252

  Fly   263 WGFGTACMHGDFYNCADRFNPGVLQAHKWENAFTLDRTSWGQRFDVSLSDFMTSKEVIKEIITTV 327
            ||.|..|.||.:|||||:|||..|..||||...::|:.|||.|.::.||:.|...|::::::..|
Zfish   253 WGNGCYCKHGGYYNCADKFNPQKLLNHKWEKCQSVDKISWGYRRNMKLSELMDLPELVQDLVYIV 317

  Fly   328 SCNGNVLINVGPTKFGTILPIFEERLRDMGRWLKFNGEGIYGSVPWIYQNDTINGNVWYTRQKEA 392
            :..||.|::.|||..|.|.|:||||||.:|.||:.|||.|||:..|..|.:.....||||.:|. 
Zfish   318 ALGGNYLLSTGPTADGVIAPVFEERLRGIGAWLQINGEAIYGTSFWRVQTENATVPVWYTAKKS- 381

  Fly   393 SNGKITIYAFVLEYPYDTNELDIYPLGKDINIFRNVMLTGIDMGTGGDILNEQSTEVVMLGMEDT 457
                 |:||.     :.||.:.        |.|:.......|           ||.|.:|| ...
Zfish   382 -----TVYAI-----FTTNPMQ--------NTFQLSAPNTTD-----------STVVTLLG-SPK 416

  Fly   458 KIKW-NADHNRLHIVFP-----PKNHIDKRGLDYAWTFKI 491
            .:|| ....:.|.:|.|     |.         ||||.|:
Zfish   417 PLKWAPLQSSGLMVVLPELPFSPA---------YAWTLKM 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FucaNP_001303363.1 Alpha_L_fucos 28..409 CDD:214829 202/380 (53%)
AfuC 60..>373 CDD:226195 174/312 (56%)
Fucosidase_C 376..492 CDD:293362 30/122 (25%)
fuca1.1NP_997905.1 Alpha_L_fucos 23..401 CDD:214829 206/397 (52%)
AfuC 51..>371 CDD:226195 176/320 (55%)
Fucosidase_C 366..448 CDD:293362 30/122 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583940
Domainoid 1 1.000 449 1.000 Domainoid score I492
eggNOG 1 0.900 - - E1_COG3669
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 483 1.000 Inparanoid score I1408
OMA 1 1.010 - - QHG62607
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002668
OrthoInspector 1 1.000 - - otm26276
orthoMCL 1 0.900 - - OOG6_102401
Panther 1 1.100 - - O PTHR10030
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2531
SonicParanoid 1 1.000 - - X1781
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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