DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fuca and W03G11.3

DIOPT Version :10

Sequence 1:NP_648472.1 Gene:Fuca / 3772574 FlyBaseID:FBgn0285958 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_510020.2 Gene:W03G11.3 / 189173 WormBaseID:WBGene00012225 Length:482 Species:Caenorhabditis elegans


Alignment Length:482 Identity:213/482 - (44%)
Similarity:298/482 - (61%) Gaps:63/482 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVALI--VVWISAAEVDAQVPGPRTRYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSE 72
            ::.||  ::::..|..|         |.|:|.|||.||||.||||:|.|||.|:|:||||:|.||
 Worm     1 MIFLIFSILFLHLANCD---------YTPDWESLDNRPLPSWYDDSKFGIFCHWGLYSVPAFRSE 56

  Fly    73 WFWTNWKNLR-NPEYVQFMQRNYKPDFTYQEFASQFTAELFNATKWALLFKDSGARYVVLTSKHH 136
            |.|..||..: :.:.|.|:.:||||..||.:||..||||.|||.::|...|.|||||.|.|||||
 Worm    57 WMWWYWKGTQPDKDVVNFVDKNYKPGTTYADFAKDFTAEYFNANQFAETVKTSGARYFVFTSKHH 121

  Fly   137 DGFTLWPSKNSYGWNSMDVGPKRDIVKELAAAIRKESDLRFGLYYSLFEWFNPLWTDD-KLHLLM 200
            :|||:|||:.|:.|||||:|||||||.||..|.:| :|:.||||:|.||||:|::.|| |.:...
 Worm   122 EGFTMWPSRTSWNWNSMDIGPKRDIVGELRDAFKK-TDVHFGLYFSQFEWFHPMFLDDGKFNTTF 185

  Fly   201 QQHFVERKVRPEQMELVQQYLPEIIWSDGDWEAPAKYWRSEEFIAWLYNDSPVRDTVVTNDRWGF 265
               :.|:...|:.:::|.:|.||::||||:|:....||:::||:|||||.|||:|.||.|||||.
 Worm   186 ---YPEQVSYPQMIDIVTKYNPEVVWSDGEWDKSDDYWKAKEFLAWLYNSSPVKDQVVVNDRWGT 247

  Fly   266 GTACMHGDFYNCADRFNPGVLQAHKWENAFTLDRTSWGQRFDVSLSDFMTSKEVIKEIITTVSCN 330
            ||...||.|...:|.::||.|...||||..|||:.|||.|.|:..|:..|:.|:|:::..|::||
 Worm   248 GTMGKHGGFMTYSDHYDPGKLLEKKWENCMTLDKHSWGNRRDMKASEVNTAYEIIEQLARTIACN 312

  Fly   331 GNVLINVGPTKFGTILPIFEERLRDMGRWLKFNGEGIYGSVPWIYQNDTINGNVWYTRQKEASNG 395
            ||:|:||||...|.|..|||:||.::||::....|.|:|:.|||:||||...|||||  .:.|:|
 Worm   313 GNLLLNVGPNMHGQIPAIFEDRLEEIGRFVNITSEAIFGTRPWIHQNDTSASNVWYT--SKYSSG 375

  Fly   396 K------------------ITIYAFVLEYPYDTNELDIYPLGKDINIFRNVMLTGIDMGTGGDIL 442
            |                  ..:||::|:..::..||      |.:...:|...|         ||
 Worm   376 KKPLKNLYQNVYNFQLEEHTIVYAWILDTSHEQFEL------KSVKTTKNTTAT---------IL 425

  Fly   443 NEQSTEVVMLGMED--------TKIKW 461
               .|:||:.|.|:        :||.|
 Worm   426 ---GTDVVLTGFEESDSMIILSSKIDW 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FucaNP_648472.1 Alpha_L_fucos 28..409 CDD:214829 194/400 (49%)
Fucosidase_C 376..492 CDD:465259 30/112 (27%)
W03G11.3NP_510020.2 Alpha_L_fucos 12..377 CDD:214829 192/379 (51%)
Fucosidase_C 358..463 CDD:465259 30/112 (27%)

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