Protein Alignment SLIRP1 and SGN1

DIOPT Version :10

• Sequence 1: NP_001027083.1
• Gene: SLIRP1 / 3772560
• FlyBaseID: FBgn0064117
• Length: 90
• Species: Drosophila melanogaster
• Sequence 2: NP_012266.1
• Gene: SGN1 / 854817
• SGDID: S000001440
• Length: 250
• Species: Saccharomyces cerevisiae
• Alignment Length: 72
• Identity: 22/72 - (30%)
• Similarity: 40/72 - (55%)
• Gaps: 7/72 - (9%)

  Fly     7 VAKVGKSVHR-------IFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFN 64
            ::|..|..|:       |||||:...|..:::..:|::.|::....:::|:.||..||||::.|.
Yeast    49 LSKEEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFE 113

  Fly    65 SLTALEK 71
            |....||
Yeast   114 SPAYREK 120

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SLIRP1	NP_001027083.1	RRM_SLIRP	16..88	CDD:409688	19/63 (30%)
SGN1	NP_012266.1	PABP-1234	<52..>202	CDD:130689	21/69 (30%)
		RRM_II_PABPs	65..137	CDD:409747	19/56 (34%)