Protein Alignment SLIRP1 and AT1G20880

DIOPT Version :10

• Sequence 1: NP_001027083.1
• Gene: SLIRP1 / 3772560
• FlyBaseID: FBgn0064117
• Length: 90
• Species: Drosophila melanogaster
• Sequence 2: NP_564127.1
• Gene: AT1G20880 / 838681
• AraportID: AT1G20880
• Length: 274
• Species: Arabidopsis thaliana
• Alignment Length: 71
• Identity: 28/71 - (39%)
• Similarity: 41/71 - (57%)
• Gaps: 0/71 - (0%)

  Fly    16 RIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLTALEKIENEQKHIL 80
            ::|||.|.|....:.||.:|.::|.::.|.||.||.||.|||||||:|....|..:...:...|:
plant    25 KVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACVDPTPII 89

  Fly    81 EGNYLN 86
            :|...|
plant    90 DGRRAN 95

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SLIRP1	NP_001027083.1	RRM_SLIRP	16..88	CDD:409688	28/71 (39%)
AT1G20880	NP_564127.1	RRM_RBM24_RBM38_like	24..99	CDD:409818	28/71 (39%)
		PABP-1234	<37..246	CDD:130689	23/59 (39%)