DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLIRP1 and CG10466

DIOPT Version :10

Sequence 1:NP_001027083.1 Gene:SLIRP1 / 3772560 FlyBaseID:FBgn0064117 Length:90 Species:Drosophila melanogaster
Sequence 2:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster


Alignment Length:70 Identity:23/70 - (32%)
Similarity:39/70 - (55%) Gaps:9/70 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLTALEKIENEQKHILE 81
            |||...|:|:...:|...|.::|.||:.|:|.|.:||.|||:.|:.:         |:::..:|.
  Fly    36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCY---------EDQRSTVLA 91

  Fly    82 GNYLN 86
            .:.||
  Fly    92 VDNLN 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLIRP1NP_001027083.1 RRM_SLIRP 16..88 CDD:409688 23/70 (33%)
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 23/70 (33%)

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