DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLIRP1 and Hnrnpdl

DIOPT Version :10

Sequence 1:NP_001027083.1 Gene:SLIRP1 / 3772560 FlyBaseID:FBgn0064117 Length:90 Species:Drosophila melanogaster
Sequence 2:XP_063129121.1 Gene:Hnrnpdl / 305178 RGDID:1309950 Length:428 Species:Rattus norvegicus


Alignment Length:75 Identity:23/75 - (30%)
Similarity:43/75 - (57%) Gaps:0/75 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLTALEKIENEQKHIL 80
            ::|:|.|.|....::|..|...||.||...:..|..||.|:|:|||.|....:::|:...::|.|
  Rat   149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKL 213

  Fly    81 EGNYLNIQKS 90
            :|..::.:::
  Rat   214 DGKLIDPKRA 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLIRP1NP_001027083.1 RRM_SLIRP 16..88 CDD:409688 23/71 (32%)
HnrnpdlXP_063129121.1 None

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