DRSC/TRiP Functional Genomics Resources

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Protein Alignment Skeletor and THBD

DIOPT Version :9

Sequence 1:NP_001247027.1 Gene:Skeletor / 3772559 FlyBaseID:FBgn0262717 Length:1503 Species:Drosophila melanogaster
Sequence 2:NP_000352.1 Gene:THBD / 7056 HGNCID:11784 Length:575 Species:Homo sapiens


Alignment Length:135 Identity:34/135 - (25%)
Similarity:45/135 - (33%) Gaps:35/135 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 WNCPLPEGARGNSNSSEQEDSAPAAQSSTGGAGYPPAGR-------------------PNVEPDE 493
            |:|.:..|  |..::......||..| ...||.....||                   ||  ||:
Human   243 WDCSVENG--GCEHACNAIPGAPRCQ-CPAGAALQADGRSCTASATQSCNDLCEHFCVPN--PDQ 302

  Fly   494 E-FYENRAEALHR-QPPQRRQETAIITQRRPVPTP-KPVNSNGA--------WDIPAIQCHEPED 547
            . .|....|..:| ...|.|.|........|.|.| :.||:.|.        :|:...:|.||.|
Human   303 PGSYSCMCETGYRLAADQHRCEDVDDCILEPSPCPQRCVNTQGGFECHCYPNYDLVDGECVEPVD 367

  Fly   548 GVFYA 552
            ..|.|
Human   368 PCFRA 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SkeletorNP_001247027.1 DM13 42..149 CDD:128929
DM13 158..264 CDD:128929
DoH 286..447 CDD:214768
THBDNP_000352.1 CLECT_thrombomodulin_like 30..171 CDD:153070
FXa_inhibition 245..280 CDD:291342 10/37 (27%)
FXa_inhibition 289..323 CDD:291342 8/35 (23%)
EGF_CA 325..>355 CDD:214542 6/29 (21%)
Tme5_EGF_like 406..439 CDD:286192
EGF_CA 441..>468 CDD:214542
Involved in alpha-L/beta-2 and alpha-M/beta-2 integrin binding. /evidence=ECO:0000269|PubMed:27055590 481..515
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 484..506
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24036
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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