DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Skeletor and W01C8.5

DIOPT Version :9

Sequence 1:NP_001247027.1 Gene:Skeletor / 3772559 FlyBaseID:FBgn0262717 Length:1503 Species:Drosophila melanogaster
Sequence 2:NP_508959.1 Gene:W01C8.5 / 180836 WormBaseID:WBGene00020921 Length:511 Species:Caenorhabditis elegans


Alignment Length:730 Identity:141/730 - (19%)
Similarity:228/730 - (31%) Gaps:306/730 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LSCLASFGDAAYPY--------YGTKIGALTRLHHGVSGDVYAVDSRTIFIKKFNYDGEAPAAYF 75
            ||..||   :.|.|        ||..:|.|:.....:||.|:.|::.|:.|....:.......||
 Worm    11 LSLAAS---STYCYDINTYNADYGVYVGDLSSPETDISGQVFIVNATTLQIFNLTFSPSQQDLYF 72

  Fly    76 YVGNTARPSNEGAARLRDERGGTASLTRRYRNKDVTLSLPEGKTLRDIKWFSVWCDEFAVNFGDV 140
            ::.....|:.||......|.|.|...:....|..|.:.:||...:.:.|.||::..:...:...|
 Worm    73 WLDTKDVPTREGIKAHTFEYGITPLGSFPEDNDRVVVHVPEKHRIDEFKSFSIYSFKTDKSMASV 137

  Fly   141 SIPPNLDFPRPQKISA-LRGV-HGVSSDNIVIVDAQTLLVPNFSYDG-EAPDAKFWVGRGQRPT- 201
            ..|.|:..|:..|:|. ..|. :.:.|..:.::|.:|:.|..|:::| :||...|:.|||...: 
 Worm   138 VFPENVKIPKSVKLSTEFSGKRYQLRSGPLYVIDRRTIKVYGFTFEGNKAPKTYFYAGRGASVSY 202

  Fly   202 SDGLRIPDENGKENPLRRYER-----KTIVLTLPEDLTIFDIGHFGVWCEAFTVDFGHVRLPEG- 260
            |.|:::......|..:.....     |.|:|.|||:..||.|....|:|..:.|:||.|.:|.. 
 Worm   203 SSGVKVAIRGKDEKEISEISENYRGGKDIILELPENYDIFHIDWISVYCYKYRVNFGSVLVPTDD 267

  Fly   261 --LNVPPSLKMLGISPQSKLNCEVLYDDLAFEVRWAVAGESIVVQLVAKLEPNHYMSFGISPNKN 323
              :|:||.:      |..|.|.:               |:.              |:.|:     
 Worm   268 TLVNLPPYV------PSIKKNTD---------------GKP--------------MARGV----- 292

  Fly   324 ISQMIGADAVVAWVDPQTGNGFATDYFLEGKAQCSGGRGACPDTKISEKTNSIRLLNAAMVNGYS 388
                                       |:|.|               |:||              
 Worm   293 ---------------------------LKGSA---------------ERTN-------------- 301

  Fly   389 IVTYQRSLAATDRLDLPISITGAESVVWAIGPLNDYQEVSFHTFYNKHLHQIEFGRQPKWNCPLP 453
             .|:|                           |.|.:.:       |:|:               
 Worm   302 -FTFQ---------------------------LGDVEHI-------KNLN--------------- 316

  Fly   454 EGARGNSNSSEQEDSAPAAQSSTGGAGYPPAGRPNVEPDEEFYENRAEALHRQPPQRRQETAIIT 518
                ||..|                                                        
 Worm   317 ----GNLRS-------------------------------------------------------- 321

  Fly   519 QRRPVPTPKPVNSNGAWDIPAIQCHEPEDGVFYAQMGPTGGKHGYPAITGHVGWGISWYINGLLI 583
                   ||.|                                              |::|.::.
 Worm   322 -------PKYV----------------------------------------------WHVNSVMS 333

  Fly   584 PEIHVVRGKTYTFVVEGGNNPDIPAKYHPFYISDDPVGGYEHKREEEKKAVRIYA-GVHRSRSGQ 647
            |:::::|..||.|.||||....||..|:|.||.||..||:....:.|.:.|.|:: |:..|.:|.
 Worm   334 PDLYLMRNVTYNFNVEGGREKMIPELYNPLYIGDDENGGFSELSQNEAERVTIHSPGLIESNTGP 398

  Fly   648 VTPTGVGRLCNW--TPDVEGPPADDYQSFGAYQRTLTLKCDAGEPGV--ITWKPDRNTPDTVYYH 708
                    ||.|  ..|......|.|           |:||.....|  ..:.|:..||..:||:
 Worm   399 --------LCIWMHNKDKAANEPDTY-----------LECDGWPEDVHSFAFTPNETTPSVLYYN 444

  Fly   709 CFTHRYLGWKIHVHD 723
            ...:..:|.:|.:.|
 Worm   445 SGNNFNMGGRIFIVD 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SkeletorNP_001247027.1 DM13 42..149 CDD:128929 24/106 (23%)
DM13 158..264 CDD:128929 33/116 (28%)
DoH 286..447 CDD:214768 15/160 (9%)
W01C8.5NP_508959.1 DM13 38..146 CDD:128929 24/107 (22%)
DM13 160..264 CDD:383103 30/103 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 0.167 Domainoid score I6519
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005930
OrthoInspector 1 1.000 - - otm14242
orthoMCL 1 0.900 - - OOG6_105978
Panther 1 1.100 - - O PTHR24036
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16909
SonicParanoid 1 1.000 - - X5705
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.940

Return to query results.
Submit another query.