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Protein Alignment His2A:CG33856 and Macroh2a2
DIOPT Version :10
| Sequence 1: | NP_001027371.1 |
Gene: | His2A:CG33856 / 3772556 |
FlyBaseID: | FBgn0053856 |
Length: | 124 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001129279.1 |
Gene: | Macroh2a2 / 361844 |
RGDID: | 1561371 |
Length: | 372 |
Species: | Rattus norvegicus |
| Alignment Length: | 123 |
Identity: | 81/123 - (65%) |
| Similarity: | 92/123 - (74%) |
Gaps: | 2/123 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSGRGKGGKVKGKAKSRSDRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLEL 65
|||| .||.|....|||.|||:.|||||:.|.|:||.:..|:..|||||:|||:||||||:|||
Rat 1 MSGR--SGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEILEL 63
Fly 66 AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
||||||||||.||.|||:.||:.||||||:||.|||||.|||||.|...||.||...|
Rat 64 AGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGTK 121
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| His2A:CG33856 | NP_001027371.1 |
PTZ00017 |
16..124 |
CDD:185399 |
74/108 (69%) |
| Macroh2a2 | NP_001129279.1 |
H2A |
14..119 |
CDD:197711 |
73/104 (70%) |
| Macro_H2A-like |
178..368 |
CDD:394875 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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