DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Menl-1 and NADP-ME2

DIOPT Version :9

Sequence 1:NP_001027428.1 Gene:Menl-1 / 3772542 FlyBaseID:FBgn0029154 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_196728.1 Gene:NADP-ME2 / 831039 AraportID:AT5G11670 Length:588 Species:Arabidopsis thaliana


Alignment Length:546 Identity:221/546 - (40%)
Similarity:324/546 - (59%) Gaps:10/546 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SSSHDTIRVPIEVVFSDKCNKALAFTLEERQRLCIHGLMPACVRTYDEQMLAIESNFHSFESNVG 101
            :|.:..:|.|       :.||.||||.:||....:.||:|..:.:.|.|...:..|...:...:.
plant    47 ASGYTLMRDP-------RYNKGLAFTDKERDAHYLTGLLPPVILSQDVQERKVMHNLRQYTVPLQ 104

  Fly   102 RYRYLRALRQGYERLYFQFVSKNVHAVLPIIYTPTVGLACTVYGMLYRGMTGIHITKHDRGHMKQ 166
            ||..|..|::..|||:::.:..||..:||::||||||.||..||.::|...|::|:.:::|.:.:
plant   105 RYMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRKPQGLYISLNEKGKILE 169

  Fly   167 ILSNWPMRRSVKAICVTDGQRILGLGDLGANGMGIAVGKMELYTALAGIPPSMLLPICLDVGTNN 231
            :|.||| :|.::.|.||||:|||||||||..||||.|||:.|||||.||.||..|||.:||||||
plant   170 VLKNWP-QRGIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNN 233

  Fly   232 KSLHEDPLYIGLRDERLKGDEYVCFVDEFMEAVVSTFGDQTLIHFEDFATPNAFMFLNRYQHCYC 296
            :.|..|..||||:..|..|.||..|:.|||.||...:|::.|:.|||||..|||..|::|...:.
plant   234 EKLLNDEFYIGLKQRRATGQEYAEFLHEFMCAVKQNYGEKVLVQFEDFANHNAFDLLSKYSDSHL 298

  Fly   297 HFNDDIQGTAAVGLGGLLGIQRITKKPLEEHVIVFAGAGSAAMGIAYLLKMELMSR-GLSEADAA 360
            .|||||||||:|.|.||:..|::..|.|.:|..:|.|||.|..|||.|:.:::... |....:..
plant   299 VFNDDIQGTASVVLAGLIAAQKVLGKKLADHTFLFLGAGEAGTGIAELIALKISKETGAPITETR 363

  Fly   361 KNIYFYDQDGVLTTARK-SIPDILCVFAKNMKETKSLETLVEQVKPSIIMGATSAPGLFTEKIIR 424
            |.|:..|..|::.::|| |:......:|...|..|.|...|..:||::::|.:.....||::::.
plant   364 KKIWLVDSKGLIVSSRKESLQHFKQPWAHEHKPVKDLIGAVNAIKPTVLIGTSGVGQTFTKEVVE 428

  Fly   425 TMAASHERPGIFAFSNPTIKSECTAEQAYKFSDGKAIYSAGSPFPPVEFNGKRLTPGQANNCFAF 489
            .||.::|:|.|.|.||||.::||||||||.::.|:||:.:||||.||.::||...|||||||:.|
plant   429 AMATNNEKPLILALSNPTSQAECTAEQAYTWTKGRAIFGSGSPFDPVVYDGKTYLPGQANNCYIF 493

  Fly   490 PALVLATMTVLATRMPDEIFLLAAHELAEFPTNEEMQSGRIYPLVKQANEVAYKIGVKVAKYLIE 554
            |.|.|..:...|.|:.|::.|.|:..||...|.|...:|.|||......|::..|...||....:
plant   494 PGLGLGLIMSGAIRVRDDMLLAASEALAAQVTEEHYANGLIYPPFSNIREISANIAACVAAKTYD 558

  Fly   555 NGYAKRNLEPEDVEEYIEKNSYKLTY 580
            .|.|......:|:.::.|.:.|...|
plant   559 LGLASNLPRAKDLVKFAESSMYSPVY 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Menl-1NP_001027428.1 PLN03129 35..582 CDD:215594 221/546 (40%)
malic 114..292 CDD:278802 92/177 (52%)
NAD_bind_1_malic_enz 302..576 CDD:133454 101/275 (37%)
NADP-ME2NP_196728.1 PLN03129 14..588 CDD:215594 221/546 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60768
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100205
Panther 1 1.100 - - O PTHR23406
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.780

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