DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Menl-1 and NAD-ME2

DIOPT Version :9

Sequence 1:NP_001027428.1 Gene:Menl-1 / 3772542 FlyBaseID:FBgn0029154 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_191966.2 Gene:NAD-ME2 / 828222 AraportID:AT4G00570 Length:607 Species:Arabidopsis thaliana


Alignment Length:609 Identity:226/609 - (37%)
Similarity:342/609 - (56%) Gaps:42/609 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GITRGSSISKTHQSNCECSPNLIKIRPSSSHDTIRVPIEVVFSDKCNKALAFTLEERQRLCIHGL 74
            |:::.::.::||.|. .|....|. .|...|   :...:::.....||...|.|.||.||.|.||
plant     8 GLSKAAAAARTHGSR-RCFSTAIP-GPCIVH---KRGADILHDPWFNKDTGFPLTERDRLGIRGL 67

  Fly    75 MPACVRTYDEQMLAIESNFHSFESN----------VGRYRYLRALRQGYERLYFQFVSKNVHAVL 129
            :|..|.|..:|......:|.|.|:|          :.::|.|..|....|.||::.:..|:....
plant    68 LPPRVMTCVQQCDRFIESFRSLENNTKGEPENVVALAKWRMLNRLHDRNETLYYRVLIDNIKDFA 132

  Fly   130 PIIYTPTVGLACTVYGMLYRGMTGIHITKHDRGHMKQILSNWPMRRSVKAICVTDGQRILGLGDL 194
            ||||||||||.|..|..|||...|::.:..|:|.|..::.|||..: |..|.:|||.||||||||
plant   133 PIIYTPTVGLVCQNYSGLYRRPRGMYFSAKDKGEMMSMIYNWPAPQ-VDMIVITDGSRILGLGDL 196

  Fly   195 GANGMGIAVGKMELYTALAGIPPSMLLPICLDVGTNNKSLHEDPLYIGLRDERLKGDEYVCFVDE 259
            |..|:||.:||:::|.|.|||.|..:|||.|||||||:.|.::.||:|:|..||:|:||:..:||
plant   197 GVQGIGIPIGKLDMYVAAAGINPQRVLPIMLDVGTNNEKLLQNDLYLGVRQPRLEGEEYLEIIDE 261

  Fly   260 FMEAVVSTFGDQTLIHFEDFATPNAFMFLNRYQHCYCHFNDDIQGTAAVGLGGLLGIQRITKKPL 324
            ||||..:.: .:.::.||||....||..|.||:..:|.||||:||||.|.|.||||..|...:|:
plant   262 FMEAAFTRW-PKAVVQFEDFQAKWAFGTLERYRKKFCMFNDDVQGTAGVALAGLLGTVRAQGRPI 325

  Fly   325 EEHV---IVFAGAGSAAMGIAYLLKMELMS----RGLSEADAAKNIYFYDQDGVLTTARKSIPDI 382
            .:.|   ||..|||||.:|:.   ||.:.:    .|:||::|.||.|..|:||::||.|..:...
plant   326 SDFVNQKIVVVGAGSAGLGVT---KMAVQAVARMAGISESEATKNFYLIDKDGLVTTERTKLDPG 387

  Fly   383 LCVFAKN---MKETKSLETLVEQVKPSIIMGATSAPGLFTEKIIRTMAASHE-RPGIFAFSNPTI 443
            ..:||||   ::|..|:..:|::|:|.:::|.:...|:|.|::::.|..|.. :|.|||.||||:
plant   388 AVLFAKNPAEIREGASIVEVVKKVRPHVLLGLSGVGGIFNEEVLKAMRESDSCKPAIFAMSNPTL 452

  Fly   444 KSECTAEQAYKFSDGKAIYSAGSPFPPVEF-NGKRLTPGQANNCFAFPALVLATMTVLATRMPDE 507
            .:||||..|:|.:.|..::::||||..||. |||.....||||.:.||.:.|.|:...|..:.|.
plant   453 NAECTAADAFKHAGGNIVFASGSPFENVELENGKVGHVNQANNMYLFPGIGLGTLLSGARIVTDG 517

  Fly   508 IFLLAAHELAEFPTNEEMQSGRIYPLVKQANEVAYKIGVKVAKYLIENGYAK----------RNL 562
            :...|:..||.:.|:||:|.|.:||.:.....:..::|..|.:..:.:..|:          .::
plant   518 MLQAASECLASYMTDEEVQKGILYPSINNIRHITAEVGAAVLRAAVTDDIAEGHGDVGPKDLSHM 582

  Fly   563 EPEDVEEYIEKNSYKLTYGSSLAE 586
            ..||...||.:|.:...|...:.|
plant   583 SKEDTVNYITRNMWFPVYSPLVHE 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Menl-1NP_001027428.1 PLN03129 35..582 CDD:215594 219/578 (38%)
malic 114..292 CDD:278802 85/177 (48%)
NAD_bind_1_malic_enz 302..576 CDD:133454 103/295 (35%)
NAD-ME2NP_191966.2 PLN03129 17..604 CDD:215594 224/596 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60768
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100205
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X340
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.680

Return to query results.
Submit another query.